Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583561
Identifier: 121583561
GI number: 121583561
Start: 18573
End: 19037
Strand: Reverse
Name: 121583561
Synonym: Pnap_4990
Alternate gene names: NA
Gene position: 19037-18573 (Counterclockwise)
Preceding gene: 121583562
Following gene: 121583560
Centisome position: 88.09
GC content: 61.94
Gene sequence:
>465_bases ATGTCCACTACAGCAAATACCATCGACCATCTCACCCTGGAGCGGCTCGTCGAAGCCGGAGCCGTTCGCGGCGCGGATGT GATCGGCCACCCCGGCGGATGGGGGGTTATCGTCAAGTACGGCATGACCGAGCGCGCACTGGCCGCCAGGCGCGGAGCCG TGCGGACGTTTCGCAAGTTTGAAACGCTCGTGGGTTATCTCAAGGACGTGGGGATTTGTGAATACCACGTCAACGCGGCC AACTTTGACGCCGCAGCGCTCAAGACCACGCGGGTGCGGCCAGATTCATCCGAGCGCATGCGCAGCGCCTTTGAAGCGTC AGCGCAAACCAAGCGGATGCAGCAGCAAGCCGATGCGTCGCTGGCCGACACGCGGCCCAACGTTTCGCACGAGCAGGCCA TGTCCAGCGTTCAAGCAGTGATCGACACGAAACGCAAGAAGCATGAAGCCAAAGCCGCAGCTTGA
Upstream 100 bases:
>100_bases ATGTTGAGTAGAGAAGAAATATTAACGAATGTCGGTTACCAAATTACCGTTACTTGGTTATAATTGTAGTTGTTATTTCT ACACCAAAATGGGAAACTCA
Downstream 100 bases:
>100_bases GTGGCGTCAGCAGGCGATTGATGACCTGGTGGAAATTGTCGAGTACATCGCCGAAGACAACCCCGACGCGGCACAAGAAC TCAAGGACGAAATTGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAA NFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA
Sequences:
>Translated_154_residues MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAA NFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA >Mature_153_residues STTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAAN FDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16771; Mature: 16640
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKF CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH ETLVGYLKDVGICEYHVNAANFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADAS HHHHHHHHHCCHHEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH LADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH ETLVGYLKDVGICEYHVNAANFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADAS HHHHHHHHHCCHHEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH LADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA