Definition Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence.
Accession NC_008762
Length 21,611

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The map label for this gene is 121583561

Identifier: 121583561

GI number: 121583561

Start: 18573

End: 19037

Strand: Reverse

Name: 121583561

Synonym: Pnap_4990

Alternate gene names: NA

Gene position: 19037-18573 (Counterclockwise)

Preceding gene: 121583562

Following gene: 121583560

Centisome position: 88.09

GC content: 61.94

Gene sequence:

>465_bases
ATGTCCACTACAGCAAATACCATCGACCATCTCACCCTGGAGCGGCTCGTCGAAGCCGGAGCCGTTCGCGGCGCGGATGT
GATCGGCCACCCCGGCGGATGGGGGGTTATCGTCAAGTACGGCATGACCGAGCGCGCACTGGCCGCCAGGCGCGGAGCCG
TGCGGACGTTTCGCAAGTTTGAAACGCTCGTGGGTTATCTCAAGGACGTGGGGATTTGTGAATACCACGTCAACGCGGCC
AACTTTGACGCCGCAGCGCTCAAGACCACGCGGGTGCGGCCAGATTCATCCGAGCGCATGCGCAGCGCCTTTGAAGCGTC
AGCGCAAACCAAGCGGATGCAGCAGCAAGCCGATGCGTCGCTGGCCGACACGCGGCCCAACGTTTCGCACGAGCAGGCCA
TGTCCAGCGTTCAAGCAGTGATCGACACGAAACGCAAGAAGCATGAAGCCAAAGCCGCAGCTTGA

Upstream 100 bases:

>100_bases
ATGTTGAGTAGAGAAGAAATATTAACGAATGTCGGTTACCAAATTACCGTTACTTGGTTATAATTGTAGTTGTTATTTCT
ACACCAAAATGGGAAACTCA

Downstream 100 bases:

>100_bases
GTGGCGTCAGCAGGCGATTGATGACCTGGTGGAAATTGTCGAGTACATCGCCGAAGACAACCCCGACGCGGCACAAGAAC
TCAAGGACGAAATTGAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAA
NFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA

Sequences:

>Translated_154_residues
MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAA
NFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA
>Mature_153_residues
STTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKFETLVGYLKDVGICEYHVNAAN
FDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADASLADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16771; Mature: 16640

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ETLVGYLKDVGICEYHVNAANFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADAS
HHHHHHHHHCCHHEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
LADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTANTIDHLTLERLVEAGAVRGADVIGHPGGWGVIVKYGMTERALAARRGAVRTFRKF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ETLVGYLKDVGICEYHVNAANFDAAALKTTRVRPDSSERMRSAFEASAQTKRMQQQADAS
HHHHHHHHHCCHHEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
LADTRPNVSHEQAMSSVQAVIDTKRKKHEAKAAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA