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The map label for this gene is omp32 [H]

Identifier: 120612980

GI number: 120612980

Start: 4826134

End: 4827156

Strand: Reverse

Name: omp32 [H]

Synonym: Aave_4344

Alternate gene names: 120612980

Gene position: 4827156-4826134 (Counterclockwise)

Preceding gene: 120612981

Following gene: 120612979

Centisome position: 90.18

GC content: 63.44

Gene sequence:

>1023_bases
ATGCAGACCCAGCGTCTCGTTTCTTTCGCCGCCCTCGCTCTTCTCGGCAGTTCCGCCACCTTCGCGCAAAGCAGCGTGAC
GCTGTATGGCCGAGTCAACACCAGCATCGAACGCACCAGCCTGCTCGGCCAACACTGGACCGGCGTGAACGACAACGCGT
CCCGCTTCGGACTCAAGGGAGTGGAGGATCTGGGCGGCGGTTTGAAAGCCGGATTCCAGCTCGAAAGCGGTTTCGACAGT
TCCACCGGCGAGGCCGCACAAACCTTCTTCGGCCGCCAGAGCGAGGTGAATCTGTCGGGGAGTTTCGGCAAGATCCGCCT
GGGCAACTGGATTCCCGAGTCGTATTACGCCGTGGCGGACTACGGCGTGCAGGACCAGCCCAACCACGACACCGGTAGTT
TCTCCAACCGGCTGTACCAGTCGGTCGCCTTCGGCCATGCCAACAAGATCGGCTACCGCACGCCCGAATTCGGCGGCTTC
TGGGCCGAGGCCAGCGTGAGCGCCCATGAGAAGGTGGCACAGATCGCTCCCTCCGGCCTGCCTGCGGGCAGCAAGTACGT
CTACGACCTGGCCGCCAACTGGGAGCGCGGTCCGCTGGCGTTCGGCGCCGGTTATGCCAAGCTGGGCGACAACTGGGATG
CGGGCCTGCGCGGCCATTACACCGTGGGCGCCATCCAGGTGGCGGGCTATTACCAGCGCAACGATTACGAGGTTCTGGGG
ACGCGCAACTCGGCAGGCCTGGCGGCCCAGTACGCCTTCGGTGCATCCGAGGTGGTGGCCAACTACATCTGGGCCGGCAA
ATGGAGCAATGTGGCGGACTCCAGCGCGCAGCAATTGATCCTCGGTTACAACTACCACCTGAGCAAGCGCACCAAGGTGT
ATGCGGCCTACACCCTCATCAAGAACAAGTCGGGAGCCACTTACGGCTATCGCGCCGGTCGTTTGAGCGCCGTCGAAGGC
TTCACTCCGATTCTTGGTGGAGATCCGCGCAGCGTCGGAGTGGGCGTGCGCCACAACTTCTGA

Upstream 100 bases:

>100_bases
GATGGATCGCTTGGGGTGCACAGGTGACGCGGTATGCTTAACGGCTATTGCAGTAATGCCGTCGGCTCAGTCCACTTCAC
AACTATTTCAGGGAGTTTCC

Downstream 100 bases:

>100_bases
ACGTCGCACTTCAGCGGCGCGCCCATACGCGCCGCCGCATATCCGGGAGCCTCACGCCCTCTATGCAAGCGTGGGGCTTT
TGACTTTTTAGGAGGCTTTG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQTQRLVSFAALALLGSSATFAQSSVTLYGRVNTSIERTSLLGQHWTGVNDNASRFGLKGVEDLGGGLKAGFQLESGFDS
STGEAAQTFFGRQSEVNLSGSFGKIRLGNWIPESYYAVADYGVQDQPNHDTGSFSNRLYQSVAFGHANKIGYRTPEFGGF
WAEASVSAHEKVAQIAPSGLPAGSKYVYDLAANWERGPLAFGAGYAKLGDNWDAGLRGHYTVGAIQVAGYYQRNDYEVLG
TRNSAGLAAQYAFGASEVVANYIWAGKWSNVADSSAQQLILGYNYHLSKRTKVYAAYTLIKNKSGATYGYRAGRLSAVEG
FTPILGGDPRSVGVGVRHNF

Sequences:

>Translated_340_residues
MQTQRLVSFAALALLGSSATFAQSSVTLYGRVNTSIERTSLLGQHWTGVNDNASRFGLKGVEDLGGGLKAGFQLESGFDS
STGEAAQTFFGRQSEVNLSGSFGKIRLGNWIPESYYAVADYGVQDQPNHDTGSFSNRLYQSVAFGHANKIGYRTPEFGGF
WAEASVSAHEKVAQIAPSGLPAGSKYVYDLAANWERGPLAFGAGYAKLGDNWDAGLRGHYTVGAIQVAGYYQRNDYEVLG
TRNSAGLAAQYAFGASEVVANYIWAGKWSNVADSSAQQLILGYNYHLSKRTKVYAAYTLIKNKSGATYGYRAGRLSAVEG
FTPILGGDPRSVGVGVRHNF
>Mature_340_residues
MQTQRLVSFAALALLGSSATFAQSSVTLYGRVNTSIERTSLLGQHWTGVNDNASRFGLKGVEDLGGGLKAGFQLESGFDS
STGEAAQTFFGRQSEVNLSGSFGKIRLGNWIPESYYAVADYGVQDQPNHDTGSFSNRLYQSVAFGHANKIGYRTPEFGGF
WAEASVSAHEKVAQIAPSGLPAGSKYVYDLAANWERGPLAFGAGYAKLGDNWDAGLRGHYTVGAIQVAGYYQRNDYEVLG
TRNSAGLAAQYAFGASEVVANYIWAGKWSNVADSSAQQLILGYNYHLSKRTKVYAAYTLIKNKSGATYGYRAGRLSAVEG
FTPILGGDPRSVGVGVRHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36480; Mature: 36480

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQRLVSFAALALLGSSATFAQSSVTLYGRVNTSIERTSLLGQHWTGVNDNASRFGLKG
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCC
VEDLGGGLKAGFQLESGFDSSTGEAAQTFFGRQSEVNLSGSFGKIRLGNWIPESYYAVAD
HHHHCCCHHCCEEECCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEE
YGVQDQPNHDTGSFSNRLYQSVAFGHANKIGYRTPEFGGFWAEASVSAHEKVAQIAPSGL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCC
PAGSKYVYDLAANWERGPLAFGAGYAKLGDNWDAGLRGHYTVGAIQVAGYYQRNDYEVLG
CCCCCEEEEEECCCCCCCEEECCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEE
TRNSAGLAAQYAFGASEVVANYIWAGKWSNVADSSAQQLILGYNYHLSKRTKVYAAYTLI
CCCCCCEEEEHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEE
KNKSGATYGYRAGRLSAVEGFTPILGGDPRSVGVGVRHNF
ECCCCCCCCCCCCCEEHHCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQTQRLVSFAALALLGSSATFAQSSVTLYGRVNTSIERTSLLGQHWTGVNDNASRFGLKG
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCC
VEDLGGGLKAGFQLESGFDSSTGEAAQTFFGRQSEVNLSGSFGKIRLGNWIPESYYAVAD
HHHHCCCHHCCEEECCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEE
YGVQDQPNHDTGSFSNRLYQSVAFGHANKIGYRTPEFGGFWAEASVSAHEKVAQIAPSGL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCC
PAGSKYVYDLAANWERGPLAFGAGYAKLGDNWDAGLRGHYTVGAIQVAGYYQRNDYEVLG
CCCCCEEEEEECCCCCCCEEECCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEE
TRNSAGLAAQYAFGASEVVANYIWAGKWSNVADSSAQQLILGYNYHLSKRTKVYAAYTLI
CCCCCCEEEEHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEE
KNKSGATYGYRAGRLSAVEGFTPILGGDPRSVGVGVRHNF
ECCCCCCCCCCCCCEEHHCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]