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The map label for this gene is omp32 [H]

Identifier: 120612979

GI number: 120612979

Start: 4824697

End: 4825686

Strand: Reverse

Name: omp32 [H]

Synonym: Aave_4343

Alternate gene names: 120612979

Gene position: 4825686-4824697 (Counterclockwise)

Preceding gene: 120612980

Following gene: 120612977

Centisome position: 90.15

GC content: 65.45

Gene sequence:

>990_bases
ATGCAAAAGACCCATCGTCTGGCTCTCGCCGCTCTGGCCCTCCTGGGCAGCACCGCAGCGTTCGCGCAAAGCAGCGTCAC
GCTGTACGGTCGCGTGAACACCACCGTCGAGCGCCAGAAGGTGGGTGATTCCACCGTCACCGGCCTGTTCAACAACGCAT
CGCGCTTCGGCTTCAAGGGCGTGGAAGACCTGGGTGGCGGCCTGAAGGCCGGCTTCCAGCTGGAAAGCGGCTTCAATTCC
GATACGGGCACGACCGATTCCCGCGGCTTCTTCGCCCGCCAGAGCGAAGTGAACCTGTCGGGCGGCTTCGGTATGGTCCG
CCTGGGCCGCTGGACCGCCGAGTCCTACTTCGCCACGGCAGACTACGTCAGCCTGCACAACCATGACACCGGTTCGTCCG
CCGACGCGTTCTACGCCAGCGTGATGCGCAACCAGTTCACGAACTCCAACTCGGTGGCCTACCGCACCCCCAGCTTCGGC
GGCCTGACCGTCGAAGGCGCGGTGAGCATGCACGAGCAGACCTCCGGCGGCAAGAACCTGTACGACCTGGCCGCCAACTA
CAACCTGGGTGCCCTGGCCCTGGGCGCCGGCTATTCCAAGCTCGGCGACTCCAACCAGTTCGCCCTGCGCGCCCTCTACA
CGACCGGCCCCTTCATGGTCGGCGCCTACTACCAGCGCAGCGACGACTGGGACGCCATGTCCGACACGGCCGCCGCGGTC
GGCAAGCGCGACAACTTCCGCCTGTCCGGCGCCTACATCATGGGCGCTTCGGAGTTCCACCTGAACGTGGGCCGTGCCAA
CAGCTACAAGAACCTGACGGACAGCGCCGCCACCCAGTACACCCTGGGCTACAACTACAACCTGAGCAAGCGCACCAAGG
TGTACGGCTACTACACCCGCGTCAACAACGACCGCAACGCTTCCTACGCCACCGGCGTGGCCGGCGCGGACTTCAGCTCC
GTGGCTGTGGGCGTTCGCCACAACTTCTGA

Upstream 100 bases:

>100_bases
TACACCTAGAATTTGCGCAGTAGGTGCACTTGCATTCTGTTGCCAAAAGCCGACCGCGGTGCCTACATCCAACTTTCGAA
CAAGTATCCGAGGACATCAC

Downstream 100 bases:

>100_bases
TCGTGGTGGGTCGCGGCAGCCCTGGCTGCCGCCACAACGGCCTCACAACCCGACAAGGGCTGTGGGGCTTTTTTTCAACC
GGTTCAACTGGAATCGAAGG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MQKTHRLALAALALLGSTAAFAQSSVTLYGRVNTTVERQKVGDSTVTGLFNNASRFGFKGVEDLGGGLKAGFQLESGFNS
DTGTTDSRGFFARQSEVNLSGGFGMVRLGRWTAESYFATADYVSLHNHDTGSSADAFYASVMRNQFTNSNSVAYRTPSFG
GLTVEGAVSMHEQTSGGKNLYDLAANYNLGALALGAGYSKLGDSNQFALRALYTTGPFMVGAYYQRSDDWDAMSDTAAAV
GKRDNFRLSGAYIMGASEFHLNVGRANSYKNLTDSAATQYTLGYNYNLSKRTKVYGYYTRVNNDRNASYATGVAGADFSS
VAVGVRHNF

Sequences:

>Translated_329_residues
MQKTHRLALAALALLGSTAAFAQSSVTLYGRVNTTVERQKVGDSTVTGLFNNASRFGFKGVEDLGGGLKAGFQLESGFNS
DTGTTDSRGFFARQSEVNLSGGFGMVRLGRWTAESYFATADYVSLHNHDTGSSADAFYASVMRNQFTNSNSVAYRTPSFG
GLTVEGAVSMHEQTSGGKNLYDLAANYNLGALALGAGYSKLGDSNQFALRALYTTGPFMVGAYYQRSDDWDAMSDTAAAV
GKRDNFRLSGAYIMGASEFHLNVGRANSYKNLTDSAATQYTLGYNYNLSKRTKVYGYYTRVNNDRNASYATGVAGADFSS
VAVGVRHNF
>Mature_329_residues
MQKTHRLALAALALLGSTAAFAQSSVTLYGRVNTTVERQKVGDSTVTGLFNNASRFGFKGVEDLGGGLKAGFQLESGFNS
DTGTTDSRGFFARQSEVNLSGGFGMVRLGRWTAESYFATADYVSLHNHDTGSSADAFYASVMRNQFTNSNSVAYRTPSFG
GLTVEGAVSMHEQTSGGKNLYDLAANYNLGALALGAGYSKLGDSNQFALRALYTTGPFMVGAYYQRSDDWDAMSDTAAAV
GKRDNFRLSGAYIMGASEFHLNVGRANSYKNLTDSAATQYTLGYNYNLSKRTKVYGYYTRVNNDRNASYATGVAGADFSS
VAVGVRHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 35306; Mature: 35306

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTHRLALAALALLGSTAAFAQSSVTLYGRVNTTVERQKVGDSTVTGLFNNASRFGFKG
CCHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECCEEHHHHCCCHHHHHHHCCCCCCCCCC
VEDLGGGLKAGFQLESGFNSDTGTTDSRGFFARQSEVNLSGGFGMVRLGRWTAESYFATA
HHHHCCCHHCCEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEECCEECCCEEEEE
DYVSLHNHDTGSSADAFYASVMRNQFTNSNSVAYRTPSFGGLTVEGAVSMHEQTSGGKNL
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECEEEEHHCCCCCCEE
YDLAANYNLGALALGAGYSKLGDSNQFALRALYTTGPFMVGAYYQRSDDWDAMSDTAAAV
EEEECCCCCCEEEECCCHHHCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH
GKRDNFRLSGAYIMGASEFHLNVGRANSYKNLTDSAATQYTLGYNYNLSKRTKVYGYYTR
CCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEE
VNNDRNASYATGVAGADFSSVAVGVRHNF
ECCCCCCCEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQKTHRLALAALALLGSTAAFAQSSVTLYGRVNTTVERQKVGDSTVTGLFNNASRFGFKG
CCHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECCEEHHHHCCCHHHHHHHCCCCCCCCCC
VEDLGGGLKAGFQLESGFNSDTGTTDSRGFFARQSEVNLSGGFGMVRLGRWTAESYFATA
HHHHCCCHHCCEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEECCEECCCEEEEE
DYVSLHNHDTGSSADAFYASVMRNQFTNSNSVAYRTPSFGGLTVEGAVSMHEQTSGGKNL
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECEEEEHHCCCCCCEE
YDLAANYNLGALALGAGYSKLGDSNQFALRALYTTGPFMVGAYYQRSDDWDAMSDTAAAV
EEEECCCCCCEEEECCCHHHCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH
GKRDNFRLSGAYIMGASEFHLNVGRANSYKNLTDSAATQYTLGYNYNLSKRTKVYGYYTR
CCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEE
VNNDRNASYATGVAGADFSSVAVGVRHNF
ECCCCCCCEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]