Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612918
Identifier: 120612918
GI number: 120612918
Start: 4749740
End: 4750285
Strand: Reverse
Name: 120612918
Synonym: Aave_4282
Alternate gene names: NA
Gene position: 4750285-4749740 (Counterclockwise)
Preceding gene: 120612925
Following gene: 120612917
Centisome position: 88.74
GC content: 68.86
Gene sequence:
>546_bases ATGCTGCGCTTCTTCCTCATCTTCCTCACCCTCCAGCTCACCCTGTTCGGCATCAACATGCTCAACTGGGTGCAGGAGCA CCTGGTGCTGCCGTGGACGGCGCTGCTCGCGCGCATCTGCGCGACGATGGTGATGTGGTTCGACAGCTCGGCCGCGGCGG CGGGCAAGGTGCTCTGGAACCACCAGACGGGCTTCGGCGTGTCGATCGAGGCGGGCTGCAACGGGATCGAGGCCTGCATC GTGCTGTTCGCGGCGGTGATGGCCTTCCCCTCGACCTGGCGGCACAAGCTGGTCGGGCTGGCGGCGGGCTTCGTGGCGGT GCAGGCGCTCAACATCGTGCGGGTGATCAGCCTGTTCTACCTGGGCCAGTGGAGCACGTCGGTGTTCAATTTCGCGCACG AGTACCTCTGGCAGGCGTTGATCATGGTGGACGTGCTCATCGTCTGGCTGCTGTGGGTGCGCGCGGGCAGCAGGCCGTCG TCCGCCGGTTCCCCGCCCGGCCCGGGCGCGCCGCCGGCCACGCCCCCGGCCGCGGCCCTGGCCTGA
Upstream 100 bases:
>100_bases TGCGTCTGTACAAACACGCATGAGGCGCTGATCGGGCGGCTCCCCACCGCTCCCGGATAATGCGCAGCGATCCCCACGTC CTCCGCGGAGCCCCACGGCC
Downstream 100 bases:
>100_bases AGCCTCGCGACCGCGATGCGCCGCGCCGCCAGCCTGAAGGCCTTCGTCATCGGCCTCTTCATCGGGGTCGTGCTGCTCAC GCTCGCGTGGACGCGGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLRFFLIFLTLQLTLFGINMLNWVQEHLVLPWTALLARICATMVMWFDSSAAAAGKVLWNHQTGFGVSIEAGCNGIEACI VLFAAVMAFPSTWRHKLVGLAAGFVAVQALNIVRVISLFYLGQWSTSVFNFAHEYLWQALIMVDVLIVWLLWVRAGSRPS SAGSPPGPGAPPATPPAAALA
Sequences:
>Translated_181_residues MLRFFLIFLTLQLTLFGINMLNWVQEHLVLPWTALLARICATMVMWFDSSAAAAGKVLWNHQTGFGVSIEAGCNGIEACI VLFAAVMAFPSTWRHKLVGLAAGFVAVQALNIVRVISLFYLGQWSTSVFNFAHEYLWQALIMVDVLIVWLLWVRAGSRPS SAGSPPGPGAPPATPPAAALA >Mature_181_residues MLRFFLIFLTLQLTLFGINMLNWVQEHLVLPWTALLARICATMVMWFDSSAAAAGKVLWNHQTGFGVSIEAGCNGIEACI VLFAAVMAFPSTWRHKLVGLAAGFVAVQALNIVRVISLFYLGQWSTSVFNFAHEYLWQALIMVDVLIVWLLWVRAGSRPS SAGSPPGPGAPPATPPAAALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19685; Mature: 19685
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFFLIFLTLQLTLFGINMLNWVQEHLVLPWTALLARICATMVMWFDSSAAAAGKVLWN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HQTGFGVSIEAGCNGIEACIVLFAAVMAFPSTWRHKLVGLAAGFVAVQALNIVRVISLFY CCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQWSTSVFNFAHEYLWQALIMVDVLIVWLLWVRAGSRPSSAGSPPGPGAPPATPPAAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure MLRFFLIFLTLQLTLFGINMLNWVQEHLVLPWTALLARICATMVMWFDSSAAAAGKVLWN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HQTGFGVSIEAGCNGIEACIVLFAAVMAFPSTWRHKLVGLAAGFVAVQALNIVRVISLFY CCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQWSTSVFNFAHEYLWQALIMVDVLIVWLLWVRAGSRPSSAGSPPGPGAPPATPPAAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA