Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612917
Identifier: 120612917
GI number: 120612917
Start: 4748900
End: 4749724
Strand: Reverse
Name: 120612917
Synonym: Aave_4281
Alternate gene names: NA
Gene position: 4749724-4748900 (Counterclockwise)
Preceding gene: 120612918
Following gene: 120612916
Centisome position: 88.73
GC content: 75.27
Gene sequence:
>825_bases ATGCGCCGCGCCGCCAGCCTGAAGGCCTTCGTCATCGGCCTCTTCATCGGGGTCGTGCTGCTCACGCTCGCGTGGACGCG GGTGTCGCCCTGGACGTCCTACCCCGTCGGCCTGGTGGCCGGGGCGGCGCTGGAGCGCACCGCGCCCGGCTGGGTGCGCG AGGCGCGCCTCGCCCCGGGGCGGCTGGAGGTGGATACCTCGGTGGCCATCGCCACGCCGCAGACGGGCAACCAGCCGGTG GAGATCACCCTCGAATCCGATCCGGGCCGCTACGCCTACGGGCTGCCGATCTTCCTGGCGCTGCTGCTGGCCGCGCGCGG GCCCGGCCGCACGGTGCGGGCGCTGGCCGGCTACGCGCTGCTGCTGCCGCTGCAGGCCTTCAGCCTCTGCATGCAACTGC TGATGCAACTGCTGCTGACGGCGCAGTTCGACGTGCGCACGCTGCGCGTGGCGCAGTGGCAGATGGAGGCCCTGGTCTAT GGCTACCAGCTGGGATCGCTGGTGGTGCCGACGCTGGCGCCGATCGTGATCTGGCTCTGGCTGGACCGGGCGTTCGTGAA CGAGGTGGTGATCGGTGCCTGGCGGCGGTCCATGGCCGCCCGCGCCGGGGTTCCCGCGCAGGCCGGGGCTCCCGCGCAGG AGCCGACGGCCGCGCCGGACGCCGATGGGGTGCCCGGCGCGGGCGCGGCGGCGCCGGCTTCTCCCGACCCGGCCGCAGAG GCTCCCGCGGCCGGCGTTCCGGTTCCGCCGGAGCGCTCCGTCGGCGGTATTCCGGTGTCTTCCAGCGCCTCGGCGGGCCT GCCCCCGCGCCGGCCCCTGCGCTGA
Upstream 100 bases:
>100_bases CGCGGGCAGCAGGCCGTCGTCCGCCGGTTCCCCGCCCGGCCCGGGCGCGCCGCCGGCCACGCCCCCGGCCGCGGCCCTGG CCTGAAGCCTCGCGACCGCG
Downstream 100 bases:
>100_bases CCTTCCTGCCCGGCAGTGTGGCGGCCGAGTCACACCGGGGGCAGGCCGACACGGCCGCGCCGCCGGGCGCTGCCAGAATG CCGGCCCATGCGTAGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRRAASLKAFVIGLFIGVVLLTLAWTRVSPWTSYPVGLVAGAALERTAPGWVREARLAPGRLEVDTSVAIATPQTGNQPV EITLESDPGRYAYGLPIFLALLLAARGPGRTVRALAGYALLLPLQAFSLCMQLLMQLLLTAQFDVRTLRVAQWQMEALVY GYQLGSLVVPTLAPIVIWLWLDRAFVNEVVIGAWRRSMAARAGVPAQAGAPAQEPTAAPDADGVPGAGAAAPASPDPAAE APAAGVPVPPERSVGGIPVSSSASAGLPPRRPLR
Sequences:
>Translated_274_residues MRRAASLKAFVIGLFIGVVLLTLAWTRVSPWTSYPVGLVAGAALERTAPGWVREARLAPGRLEVDTSVAIATPQTGNQPV EITLESDPGRYAYGLPIFLALLLAARGPGRTVRALAGYALLLPLQAFSLCMQLLMQLLLTAQFDVRTLRVAQWQMEALVY GYQLGSLVVPTLAPIVIWLWLDRAFVNEVVIGAWRRSMAARAGVPAQAGAPAQEPTAAPDADGVPGAGAAAPASPDPAAE APAAGVPVPPERSVGGIPVSSSASAGLPPRRPLR >Mature_274_residues MRRAASLKAFVIGLFIGVVLLTLAWTRVSPWTSYPVGLVAGAALERTAPGWVREARLAPGRLEVDTSVAIATPQTGNQPV EITLESDPGRYAYGLPIFLALLLAARGPGRTVRALAGYALLLPLQAFSLCMQLLMQLLLTAQFDVRTLRVAQWQMEALVY GYQLGSLVVPTLAPIVIWLWLDRAFVNEVVIGAWRRSMAARAGVPAQAGAPAQEPTAAPDADGVPGAGAAAPASPDPAAE APAAGVPVPPERSVGGIPVSSSASAGLPPRRPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28676; Mature: 28676
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAASLKAFVIGLFIGVVLLTLAWTRVSPWTSYPVGLVAGAALERTAPGWVREARLAPG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCC RLEVDTSVAIATPQTGNQPVEITLESDPGRYAYGLPIFLALLLAARGPGRTVRALAGYAL CEEECCEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH LLPLQAFSLCMQLLMQLLLTAQFDVRTLRVAQWQMEALVYGYQLGSLVVPTLAPIVIWLW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRAFVNEVVIGAWRRSMAARAGVPAQAGAPAQEPTAAPDADGVPGAGAAAPASPDPAAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAAGVPVPPERSVGGIPVSSSASAGLPPRRPLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRAASLKAFVIGLFIGVVLLTLAWTRVSPWTSYPVGLVAGAALERTAPGWVREARLAPG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCC RLEVDTSVAIATPQTGNQPVEITLESDPGRYAYGLPIFLALLLAARGPGRTVRALAGYAL CEEECCEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH LLPLQAFSLCMQLLMQLLLTAQFDVRTLRVAQWQMEALVYGYQLGSLVVPTLAPIVIWLW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRAFVNEVVIGAWRRSMAARAGVPAQAGAPAQEPTAAPDADGVPGAGAAAPASPDPAAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAAGVPVPPERSVGGIPVSSSASAGLPPRRPLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA