| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ybeZ [H]
Identifier: 120612877
GI number: 120612877
Start: 4699195
End: 4700145
Strand: Direct
Name: ybeZ [H]
Synonym: Aave_4241
Alternate gene names: 120612877
Gene position: 4699195-4700145 (Clockwise)
Preceding gene: 120612870
Following gene: 120612878
Centisome position: 87.79
GC content: 70.14
Gene sequence:
>951_bases GTGATCCTGCGCCATACCTTCACTCCCCACAACAACATCCGGCTCACGCACCTGTGCGGGCCCGCCGATGCCCACCTGCG CACCGTCGAGGCGGCGCTGTCCGTCGGCATCGCGCACCGCCACGAGCAGTTCAAGGTGGACGGTCCCAAGGCCCGGGCCA CCCAGGCGATGGAACTGCTGCAGGCGCTCTACGAGATCGCGGACCGGCCCATCACCGAAGAGCAGGTGCAGCTCATGCTG GCCGGCGACGGCGCCATGCGGGAGGCGGACGACGGGGCCGTGGTGCTCAACACGCGCCGCGCCGACCTGCGCGCGCGCAC GCCCACCCAGAGCGTGTACCTGGACAACATCGCCAGCCACGACATCACCTTCGGCATCGGCCCGGCCGGCACGGGCAAGA CCTACCTGGCCGTGGCCTGCGCCGTCGATGCGCTGGAGCGCAGCGCGGTGCAGCGCATCGTGCTCACCCGCCCGGCCGTG GAGGCCGGCGAGCGCCTGGGCTTCCTGCCCGGCGACCTGACCCAGAAGGTGGACCCCTACCTGCGCCCGCTCTACGACGC GCTCTACGACCTGATGGGCTACGACAAGGTGCAGAAGGCCTTCGAGCGCAATGCGCTGGAGATCGCGCCGCTGGCGTTCA TGCGCGGGCGCACGCTCAACAACGCCTTCGTCATCCTCGACGAGGCGCAGAACACCACGCCCGAGCAGATGAAGATGTTC CTCACGCGCATCGGCTTCGGCGCCAGGGCGGTGGTGACGGGCGACGTGAGCCAGATCGACCTGCCCAAGGGCGCGATGAG CGGCCTGATCGACGCCGAGCGGGTGCTCAAGCGCGTCAAGGGCATCGCCGTGACGCGCTTCACCAGCGCGGACGTGGTGC GGCACCCGCTGGTGGCACGCATCGTCGATGCCTACGACGCCCAGCGCAGCAGCCGTTCCCCGGCGGCATGA
Upstream 100 bases:
>100_bases GCACCTCGGGCGGGTTTTTCTCCAGCAGCGTGCCGGTGAGTTTGCCTATCATCTTCGTCCTGTCTTTTCGTCCTGCTGAC GTCCAACCGGAATTATCCGC
Downstream 100 bases:
>100_bases TGCGGCGGCGAACCCCATGGCCCTGAACCAGCTTTCCCTGTCCCTGCAGTTCGCGCGGTTTCCCGGCGTGGAGGCGCACC GCGCCGCCCTGCCCCGGCAT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MILRHTFTPHNNIRLTHLCGPADAHLRTVEAALSVGIAHRHEQFKVDGPKARATQAMELLQALYEIADRPITEEQVQLML AGDGAMREADDGAVVLNTRRADLRARTPTQSVYLDNIASHDITFGIGPAGTGKTYLAVACAVDALERSAVQRIVLTRPAV EAGERLGFLPGDLTQKVDPYLRPLYDALYDLMGYDKVQKAFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMF LTRIGFGARAVVTGDVSQIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVARIVDAYDAQRSSRSPAA
Sequences:
>Translated_316_residues MILRHTFTPHNNIRLTHLCGPADAHLRTVEAALSVGIAHRHEQFKVDGPKARATQAMELLQALYEIADRPITEEQVQLML AGDGAMREADDGAVVLNTRRADLRARTPTQSVYLDNIASHDITFGIGPAGTGKTYLAVACAVDALERSAVQRIVLTRPAV EAGERLGFLPGDLTQKVDPYLRPLYDALYDLMGYDKVQKAFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMF LTRIGFGARAVVTGDVSQIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVARIVDAYDAQRSSRSPAA >Mature_316_residues MILRHTFTPHNNIRLTHLCGPADAHLRTVEAALSVGIAHRHEQFKVDGPKARATQAMELLQALYEIADRPITEEQVQLML AGDGAMREADDGAVVLNTRRADLRARTPTQSVYLDNIASHDITFGIGPAGTGKTYLAVACAVDALERSAVQRIVLTRPAV EAGERLGFLPGDLTQKVDPYLRPLYDALYDLMGYDKVQKAFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMF LTRIGFGARAVVTGDVSQIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVARIVDAYDAQRSSRSPAA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=320, Percent_Identity=54.6875, Blast_Score=330, Evalue=6e-92, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=47.2906403940887, Blast_Score=187, Evalue=7e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 34597; Mature: 34597
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRHTFTPHNNIRLTHLCGPADAHLRTVEAALSVGIAHRHEQFKVDGPKARATQAMELL CCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHH QALYEIADRPITEEQVQLMLAGDGAMREADDGAVVLNTRRADLRARTPTQSVYLDNIASH HHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCC DITFGIGPAGTGKTYLAVACAVDALERSAVQRIVLTRPAVEAGERLGFLPGDLTQKVDPY CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHH LRPLYDALYDLMGYDKVQKAFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMF HHHHHHHHHHHHCHHHHHHHHHCCCEEEHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH LTRIGFGARAVVTGDVSQIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVAR HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH IVDAYDAQRSSRSPAA HHHHHHHHHCCCCCCC >Mature Secondary Structure MILRHTFTPHNNIRLTHLCGPADAHLRTVEAALSVGIAHRHEQFKVDGPKARATQAMELL CCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHH QALYEIADRPITEEQVQLMLAGDGAMREADDGAVVLNTRRADLRARTPTQSVYLDNIASH HHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCC DITFGIGPAGTGKTYLAVACAVDALERSAVQRIVLTRPAVEAGERLGFLPGDLTQKVDPY CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCHH LRPLYDALYDLMGYDKVQKAFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMF HHHHHHHHHHHHCHHHHHHHHHCCCEEEHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH LTRIGFGARAVVTGDVSQIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVAR HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH IVDAYDAQRSSRSPAA HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]