Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612810
Identifier: 120612810
GI number: 120612810
Start: 4624574
End: 4625485
Strand: Reverse
Name: 120612810
Synonym: Aave_4173
Alternate gene names: NA
Gene position: 4625485-4624574 (Counterclockwise)
Preceding gene: 120612811
Following gene: 120612809
Centisome position: 86.41
GC content: 74.12
Gene sequence:
>912_bases ATGCAGCGCCTGGTGCAGCTCGCACTGGATTTCTTCGGCGGGGACGGTGGTGCCGCTCCGCCGGTCCCGCCGCGCGGCAT CCTCCCCGACGCCGCGCCGCGGAGCGTGGCCGGTCCGGATGCGCCGGGCGGAGGCGGCAACGTGCTGCGCGGGCCCGTGG AATTCCGCCACCCCCGGGCGAACCGCGAACTGCTGCTGGGCGACGTGCTGGTCGCCTACGCGCTGCAGCGGTCCCGCCGG CGCACCATCGGCTTCACCGTGGGCGCGGACGGGCTGTCCGTGCGCGCGCCCGGATGGGTCTCGCTCGCCAACGTGGATGC GTCCGTGCGGGAGAAATCCGCCTGGATCCTGCGCAAGCTCGGCGAGGCCCGGGAGCGCCAGCGGCGCCAGGCAGATGCGC GCATCGCCTGGGGTGACGGTGCCGTGCTGCCCTACATGGGCGAGCCGGTCGCCATCGTGCTGGACCCGGCGCACGGCTTC CGGGGGCAGGGCGGCGCGCTGGTGCCCGGTCCGGACGGTGCCCTGCGCCTCCACGTCGGCCTGCCCCGTGCGGCCACGCC CGTGCAGGTGCGCGATGCCGTGCAGGCCTGGCTCATGCGCGATGCGCGCCGCCATTTCACGGCCCGGCTGGACCATTTCG CCCCGCTCCTGGGTGTGCAATGGCGCACGCTGCGGCTGTCGAGCGCCCACACCCGGTGGGGCAGCGCGCGTGCCGATGGA TCCATCCGGCTGAACTGGCGCCTGCTGCACTACCGGCCCGCCATCATCGACTACGTAGTCGCCCACGAACTCTCGCACCT GCGCCACATGGACCACAGCCCCCGCTTCTGGGACACGGTGGCGACCGTGGTGCCCGACTACGCCGCGCTGCGCGACCGGC TGCGCGACGATCCCGCGCCGCAGTGGGATTGA
Upstream 100 bases:
>100_bases GCAAGCCCGACGAACTCATGGCCGAGGTCGAAGCCTGGATCGAAGGCGAGATGCGGCGCCTGGATCCGGACGCCTACGGA GCCTCCGGCACGGACCGGTG
Downstream 100 bases:
>100_bases ACGCACCGCATTGCCTCGGCCCGACCGGCTGGCACAGAATGCGGGCATGACCACTTCCTCTCCTTCCTCTTCTTCCCCCG CCGCCGAAGTGCTTCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc Protease; Zinc Metallopeptidases-Like Protein; Zinc Metallopeptidase-Like Protein; Hydrolase; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQRLVQLALDFFGGDGGAAPPVPPRGILPDAAPRSVAGPDAPGGGGNVLRGPVEFRHPRANRELLLGDVLVAYALQRSRR RTIGFTVGADGLSVRAPGWVSLANVDASVREKSAWILRKLGEARERQRRQADARIAWGDGAVLPYMGEPVAIVLDPAHGF RGQGGALVPGPDGALRLHVGLPRAATPVQVRDAVQAWLMRDARRHFTARLDHFAPLLGVQWRTLRLSSAHTRWGSARADG SIRLNWRLLHYRPAIIDYVVAHELSHLRHMDHSPRFWDTVATVVPDYAALRDRLRDDPAPQWD
Sequences:
>Translated_303_residues MQRLVQLALDFFGGDGGAAPPVPPRGILPDAAPRSVAGPDAPGGGGNVLRGPVEFRHPRANRELLLGDVLVAYALQRSRR RTIGFTVGADGLSVRAPGWVSLANVDASVREKSAWILRKLGEARERQRRQADARIAWGDGAVLPYMGEPVAIVLDPAHGF RGQGGALVPGPDGALRLHVGLPRAATPVQVRDAVQAWLMRDARRHFTARLDHFAPLLGVQWRTLRLSSAHTRWGSARADG SIRLNWRLLHYRPAIIDYVVAHELSHLRHMDHSPRFWDTVATVVPDYAALRDRLRDDPAPQWD >Mature_303_residues MQRLVQLALDFFGGDGGAAPPVPPRGILPDAAPRSVAGPDAPGGGGNVLRGPVEFRHPRANRELLLGDVLVAYALQRSRR RTIGFTVGADGLSVRAPGWVSLANVDASVREKSAWILRKLGEARERQRRQADARIAWGDGAVLPYMGEPVAIVLDPAHGF RGQGGALVPGPDGALRLHVGLPRAATPVQVRDAVQAWLMRDARRHFTARLDHFAPLLGVQWRTLRLSSAHTRWGSARADG SIRLNWRLLHYRPAIIDYVVAHELSHLRHMDHSPRFWDTVATVVPDYAALRDRLRDDPAPQWD
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33313; Mature: 33313
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLVQLALDFFGGDGGAAPPVPPRGILPDAAPRSVAGPDAPGGGGNVLRGPVEFRHPRA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCC NRELLLGDVLVAYALQRSRRRTIGFTVGADGLSVRAPGWVSLANVDASVREKSAWILRKL CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHHH GEARERQRRQADARIAWGDGAVLPYMGEPVAIVLDPAHGFRGQGGALVPGPDGALRLHVG HHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEC LPRAATPVQVRDAVQAWLMRDARRHFTARLDHFAPLLGVQWRTLRLSSAHTRWGSARADG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCC SIRLNWRLLHYRPAIIDYVVAHELSHLRHMDHSPRFWDTVATVVPDYAALRDRLRDDPAP EEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCC QWD CCC >Mature Secondary Structure MQRLVQLALDFFGGDGGAAPPVPPRGILPDAAPRSVAGPDAPGGGGNVLRGPVEFRHPRA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCC NRELLLGDVLVAYALQRSRRRTIGFTVGADGLSVRAPGWVSLANVDASVREKSAWILRKL CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHHH GEARERQRRQADARIAWGDGAVLPYMGEPVAIVLDPAHGFRGQGGALVPGPDGALRLHVG HHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEC LPRAATPVQVRDAVQAWLMRDARRHFTARLDHFAPLLGVQWRTLRLSSAHTRWGSARADG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCC SIRLNWRLLHYRPAIIDYVVAHELSHLRHMDHSPRFWDTVATVVPDYAALRDRLRDDPAP EEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCC QWD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA