Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is plsC [H]
Identifier: 120612811
GI number: 120612811
Start: 4625485
End: 4626240
Strand: Reverse
Name: plsC [H]
Synonym: Aave_4174
Alternate gene names: 120612811
Gene position: 4626240-4625485 (Counterclockwise)
Preceding gene: 120612812
Following gene: 120612810
Centisome position: 86.43
GC content: 68.25
Gene sequence:
>756_bases ATGGCCTTCATCCGCTCCGTTCTCCATCTGCTCTGGATGGCCCTCACCGTGGTGCCCTACACCCTCGCCATCCTCGTGGC CCGGCTGTTCGGCGCGCCCACGCGCGTGCGCTACCGCATCGCGCGTGCCTGGCTCAAGCTCAGCACCGACGCGGCCCGGG TGATCATGGGCATACGCACCCGCATCACCGGCATGGAACACCTGCCGCAGGACCCGGGGCAGGGCGTGGTGCTGCTGGTC AAGCACCAGTCCACCTACGAAACCTTCCTGATGCCGGCGATCATGCCGCGCCCCCTGGCCTACGTGTTCAAGAAGGAACT GCTGCAGATTCCCTTCTTCGGCTGGTCCATCGGCAGCCTGGACATGATCCACATCGACCGCGCCCAGCGGGCGCGCGCCT TCGTCAAGGTGCTGCAGCAGGGCCGTGCGCTCCTGGCCCGCGGTACCTGGGTCATCATGTTTCCCGAGGGCACGCGCATC GACCGCGGCCAGAAGGGCGACTACAAGAGCGGCGGCACACGCCTCGCCATCGAGGCCGGCGTGCCCGTGGTGCCGGTGGC CGTGACTTCGGCCAAGGTCTGGCCACGCAAGGCCTTCGTCAAGCGCCCCGGCACCGTGGATGTCTCCATCGGCCGCCCCA TTTCCCCCATCGGGCGCAAGCCCGACGAACTCATGGCCGAGGTCGAAGCCTGGATCGAAGGCGAGATGCGGCGCCTGGAT CCGGACGCCTACGGAGCCTCCGGCACGGACCGGTGA
Upstream 100 bases:
>100_bases CCGCCGGCCGGCGACTGACACGTACCTGCGGCGTTGCGCACCGAACCGTACCCTGCCGCCGCTCCCGCTGAATTTTCCTT TCCTTCCTCCCGTCCATCGC
Downstream 100 bases:
>100_bases TGCAGCGCCTGGTGCAGCTCGCACTGGATTTCTTCGGCGGGGACGGTGGTGCCGCTCCGCCGGTCCCGCCGCGCGGCATC CTCCCCGACGCCGCGCCGCG
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAFIRSVLHLLWMALTVVPYTLAILVARLFGAPTRVRYRIARAWLKLSTDAARVIMGIRTRITGMEHLPQDPGQGVVLLV KHQSTYETFLMPAIMPRPLAYVFKKELLQIPFFGWSIGSLDMIHIDRAQRARAFVKVLQQGRALLARGTWVIMFPEGTRI DRGQKGDYKSGGTRLAIEAGVPVVPVAVTSAKVWPRKAFVKRPGTVDVSIGRPISPIGRKPDELMAEVEAWIEGEMRRLD PDAYGASGTDR
Sequences:
>Translated_251_residues MAFIRSVLHLLWMALTVVPYTLAILVARLFGAPTRVRYRIARAWLKLSTDAARVIMGIRTRITGMEHLPQDPGQGVVLLV KHQSTYETFLMPAIMPRPLAYVFKKELLQIPFFGWSIGSLDMIHIDRAQRARAFVKVLQQGRALLARGTWVIMFPEGTRI DRGQKGDYKSGGTRLAIEAGVPVVPVAVTSAKVWPRKAFVKRPGTVDVSIGRPISPIGRKPDELMAEVEAWIEGEMRRLD PDAYGASGTDR >Mature_250_residues AFIRSVLHLLWMALTVVPYTLAILVARLFGAPTRVRYRIARAWLKLSTDAARVIMGIRTRITGMEHLPQDPGQGVVLLVK HQSTYETFLMPAIMPRPLAYVFKKELLQIPFFGWSIGSLDMIHIDRAQRARAFVKVLQQGRALLARGTWVIMFPEGTRID RGQKGDYKSGGTRLAIEAGVPVVPVAVTSAKVWPRKAFVKRPGTVDVSIGRPISPIGRKPDELMAEVEAWIEGEMRRLDP DAYGASGTDR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=183, Percent_Identity=29.5081967213115, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI15100175, Length=183, Percent_Identity=29.5081967213115, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1789395, Length=177, Percent_Identity=33.8983050847458, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564032, Length=170, Percent_Identity=28.8235294117647, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320151, Length=231, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI281364648, Length=205, Percent_Identity=25.8536585365854, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24582856, Length=205, Percent_Identity=25.8536585365854, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24582854, Length=205, Percent_Identity=25.8536585365854, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641614, Length=220, Percent_Identity=25, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24641612, Length=220, Percent_Identity=25, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28029; Mature: 27897
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIRSVLHLLWMALTVVPYTLAILVARLFGAPTRVRYRIARAWLKLSTDAARVIMGIRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH RITGMEHLPQDPGQGVVLLVKHQSTYETFLMPAIMPRPLAYVFKKELLQIPFFGWSIGSL HHCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCE DMIHIDRAQRARAFVKVLQQGRALLARGTWVIMFPEGTRIDRGQKGDYKSGGTRLAIEAG EEEEECHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECC VPVVPVAVTSAKVWPRKAFVKRPGTVDVSIGRPISPIGRKPDELMAEVEAWIEGEMRRLD CCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHCC PDAYGASGTDR CCCCCCCCCCC >Mature Secondary Structure AFIRSVLHLLWMALTVVPYTLAILVARLFGAPTRVRYRIARAWLKLSTDAARVIMGIRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH RITGMEHLPQDPGQGVVLLVKHQSTYETFLMPAIMPRPLAYVFKKELLQIPFFGWSIGSL HHCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCE DMIHIDRAQRARAFVKVLQQGRALLARGTWVIMFPEGTRIDRGQKGDYKSGGTRLAIEAG EEEEECHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECC VPVVPVAVTSAKVWPRKAFVKRPGTVDVSIGRPISPIGRKPDELMAEVEAWIEGEMRRLD CCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHCC PDAYGASGTDR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]