Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612809
Identifier: 120612809
GI number: 120612809
Start: 4624084
End: 4624563
Strand: Reverse
Name: 120612809
Synonym: Aave_4172
Alternate gene names: NA
Gene position: 4624563-4624084 (Counterclockwise)
Preceding gene: 120612810
Following gene: 120612806
Centisome position: 86.4
GC content: 70.21
Gene sequence:
>480_bases TTGCCTCGGCCCGACCGGCTGGCACAGAATGCGGGCATGACCACTTCCTCTCCTTCCTCTTCTTCCCCCGCCGCCGAAGT GCTTCCTGCCGAAGGCTACGCCGGCGATGTCTCTCCCCAGACCGCATGGCAGTGGGTGCAGGGTGGCCGGGCCGTGCTGG TGGACGTGCGCACCGATGCGGAGCGCGACTGGGTGGGTTTCGTGCCGGGAGCCGTGGCCATTCCCTGGAAGGTCTATCCG GGCATGGCACTGAATCCTGGTTTCGACGAAGCCCTGCGTGCCGCCGTGCCTCCGGGCGGTCAGGCCATGATGCTGTGCCG CAGCGGGGTGCGCTCCGTAGCGGCGGCCCGCCGCGCGACCGAACTGGGGCTCACCGCCTACAACATCCTCGAAGGCTTCG AAGGCGATGCGGATGCCGACGGGCACCGCAACCGCACGGGCGGCTGGCGCCTGCGCGGCCTGCCCTGGCGCCAGGGCTGA
Upstream 100 bases:
>100_bases CGCTTCTGGGACACGGTGGCGACCGTGGTGCCCGACTACGCCGCGCTGCGCGACCGGCTGCGCGACGATCCCGCGCCGCA GTGGGATTGAACGCACCGCA
Downstream 100 bases:
>100_bases TTCCTCTCAGAACGGACCGCGCACGGGCGATGCCTGCCGCATGGCATCCGCCAGCGCCTCCTGCCCGCGTTCGCGCAGCG CCTGCACCGCACCGGCGAAA
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPRPDRLAQNAGMTTSSPSSSSPAAEVLPAEGYAGDVSPQTAWQWVQGGRAVLVDVRTDAERDWVGFVPGAVAIPWKVYP GMALNPGFDEALRAAVPPGGQAMMLCRSGVRSVAAARRATELGLTAYNILEGFEGDADADGHRNRTGGWRLRGLPWRQG
Sequences:
>Translated_159_residues MPRPDRLAQNAGMTTSSPSSSSPAAEVLPAEGYAGDVSPQTAWQWVQGGRAVLVDVRTDAERDWVGFVPGAVAIPWKVYP GMALNPGFDEALRAAVPPGGQAMMLCRSGVRSVAAARRATELGLTAYNILEGFEGDADADGHRNRTGGWRLRGLPWRQG >Mature_158_residues PRPDRLAQNAGMTTSSPSSSSPAAEVLPAEGYAGDVSPQTAWQWVQGGRAVLVDVRTDAERDWVGFVPGAVAIPWKVYPG MALNPGFDEALRAAVPPGGQAMMLCRSGVRSVAAARRATELGLTAYNILEGFEGDADADGHRNRTGGWRLRGLPWRQG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16888; Mature: 16757
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPDRLAQNAGMTTSSPSSSSPAAEVLPAEGYAGDVSPQTAWQWVQGGRAVLVDVRTDA CCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC ERDWVGFVPGAVAIPWKVYPGMALNPGFDEALRAAVPPGGQAMMLCRSGVRSVAAARRAT CCCEEEECCCCEECCEEECCCCEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ELGLTAYNILEGFEGDADADGHRNRTGGWRLRGLPWRQG HHCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure PRPDRLAQNAGMTTSSPSSSSPAAEVLPAEGYAGDVSPQTAWQWVQGGRAVLVDVRTDA CCHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC ERDWVGFVPGAVAIPWKVYPGMALNPGFDEALRAAVPPGGQAMMLCRSGVRSVAAARRAT CCCEEEECCCCEECCEEECCCCEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ELGLTAYNILEGFEGDADADGHRNRTGGWRLRGLPWRQG HHCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA