Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612785
Identifier: 120612785
GI number: 120612785
Start: 4601031
End: 4602632
Strand: Reverse
Name: 120612785
Synonym: Aave_4148
Alternate gene names: NA
Gene position: 4602632-4601031 (Counterclockwise)
Preceding gene: 120612786
Following gene: 120612784
Centisome position: 85.99
GC content: 63.55
Gene sequence:
>1602_bases ATGAAGAAAAATGTTCTGGCCCTGAGCATTGCTGCCATGATTGGTGGCCTGGGCTTCGCCGGCGCCGCATCCGCTGATGT GGTCGTCGGCGCTACTCCGCTGACGGCAACGAACGCTACGTCCCTGTCGTTCGCCGAAGGCGGCGTGGGCCATGCACTGC TGGTGCCTTACTTCAACGCGCAAAACGGCAACATGACCGTTCTGCACGTGGTGAACACCGACACCTCCCGCGGCAAGGCC GTGAAGGTCCGTTTCCGTGGCGCCCAGAACTCCGACGACATTCTGGACTTCCAGGTCTTCATGTCGCCTGGCGACGTGTG GACGGCCGCCGTGACGGCTGGCTCCGACGGCGTGGCCCAGCTGCAGACGGCTGACGGCACCTGCACGCTGCCCGCTCTGG CGAAGAACGTGCCCCAGCGTTTCGTGACCGACCGCCTGAACCAAGGCCTCGCCACCGCTGACCTGGCCAACCAGACCCGT GAAGGCTACGTTGAAATCTTCAACATGGCCGACATTCCGGCCACGCTGGCCGGCTCGAACACGACGAACCCCCTGTACAC GGCCATCAAGCACGTGAACGGCGTGGCTCCCTGCACGTCTTCCGCGCTGAACGCAACGCTGCAGAACTTCACGACGCCTG CCGCCGTGGCTGCTGCTGGTTTCGACACGCCTACCACGGGCCTGGTCGGTGACTGGTACATCATCAACGTGGCGCAAACC ACGACGTTCGCTGGCGCTGCTACGGCCATCCGTGCTGAAAACGGCGGCGCACCCGCTGTCGGTAACTTCGTGCACTTCCC GCAAATGGCTTCGAACGCAGCTACGCCGGACAACTTCACGGCTGACCCGCTGTTCCGTGCCACGAACGTGTTCAACGCCG CTGGTGTGGCTGTGACGTCTCCGAAGATCGCTGCTGCGAACTACGACCTGCCCGACATGTCCACGCCTTACACCGCCAAC GGTGGCGTGGCTGTGTCGCCGCTGGTGCAAGCCACGAATCTGACGAACGCCCTGGCTGTGACCTCCATCACCAACCAGTA CGCTACGGATGCTTCCATCTCGGCCAAGACCGACTGGCTGTTCTCCATGCCCACCCGCCGCTACAACGTGGCCGCGAACT ACGCTGCGGCTAACCAAAGCCCTGCCGACACGTCCAACGTTCGTCTGTTCACTGATCTGAACGGCAGCGGCGGCGTGGCC GATGAGCGTTTCAACCCCACCAACACTTCGCTGCAAGCTGTGGGCGGCGCGATCTGCGTGAACTCCACCGGCCAAGCGTT CTTCGACCGCGAAGAGCAAACGCAAACCGCCGGCGCCGTGTTCTCGCCTGGTTCCGTGACGCAGACCCGTTTCTGCGGCG AAACCAGCGTGCTGAGCTTCGCTTCCGGTTCCGTGCTGGGTGCTTCGGTTGCATCCCAACAGCTGACGACCGGTGCCTAC ACCAACGGCTGGAGCCGCGTGGATGTGCCGAACAACGGCCTTGGTCTGCCGATCCTGGGCGCTTCGTTCATCAAGCTGGC CAACCCGCTGGCATCGGCTGGCACGTCCGGTACCTACGGTATCACGTGGCCCCACCGCTTCACGCGTCCTGCCGCACAGT AA
Upstream 100 bases:
>100_bases AGGTTCCGCAGTACAGGCCGTGAATGCGCTGTGCTACTATTCTTTGGCGTAATCAATCGTGGTAGTTGCGCTTACCAACT TTTTAACTGGAGTTCTCGAT
Downstream 100 bases:
>100_bases TTCACTGCTGCTACGGCACTTTTCACAGCAATGTGATCCAAAAAAGGCGGGGGTCTCCCCCGCCTTTTTTCATTTCTCAC TGATGGTTGACTCCTACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MKKNVLALSIAAMIGGLGFAGAASADVVVGATPLTATNATSLSFAEGGVGHALLVPYFNAQNGNMTVLHVVNTDTSRGKA VKVRFRGAQNSDDILDFQVFMSPGDVWTAAVTAGSDGVAQLQTADGTCTLPALAKNVPQRFVTDRLNQGLATADLANQTR EGYVEIFNMADIPATLAGSNTTNPLYTAIKHVNGVAPCTSSALNATLQNFTTPAAVAAAGFDTPTTGLVGDWYIINVAQT TTFAGAATAIRAENGGAPAVGNFVHFPQMASNAATPDNFTADPLFRATNVFNAAGVAVTSPKIAAANYDLPDMSTPYTAN GGVAVSPLVQATNLTNALAVTSITNQYATDASISAKTDWLFSMPTRRYNVAANYAAANQSPADTSNVRLFTDLNGSGGVA DERFNPTNTSLQAVGGAICVNSTGQAFFDREEQTQTAGAVFSPGSVTQTRFCGETSVLSFASGSVLGASVASQQLTTGAY TNGWSRVDVPNNGLGLPILGASFIKLANPLASAGTSGTYGITWPHRFTRPAAQ
Sequences:
>Translated_533_residues MKKNVLALSIAAMIGGLGFAGAASADVVVGATPLTATNATSLSFAEGGVGHALLVPYFNAQNGNMTVLHVVNTDTSRGKA VKVRFRGAQNSDDILDFQVFMSPGDVWTAAVTAGSDGVAQLQTADGTCTLPALAKNVPQRFVTDRLNQGLATADLANQTR EGYVEIFNMADIPATLAGSNTTNPLYTAIKHVNGVAPCTSSALNATLQNFTTPAAVAAAGFDTPTTGLVGDWYIINVAQT TTFAGAATAIRAENGGAPAVGNFVHFPQMASNAATPDNFTADPLFRATNVFNAAGVAVTSPKIAAANYDLPDMSTPYTAN GGVAVSPLVQATNLTNALAVTSITNQYATDASISAKTDWLFSMPTRRYNVAANYAAANQSPADTSNVRLFTDLNGSGGVA DERFNPTNTSLQAVGGAICVNSTGQAFFDREEQTQTAGAVFSPGSVTQTRFCGETSVLSFASGSVLGASVASQQLTTGAY TNGWSRVDVPNNGLGLPILGASFIKLANPLASAGTSGTYGITWPHRFTRPAAQ >Mature_533_residues MKKNVLALSIAAMIGGLGFAGAASADVVVGATPLTATNATSLSFAEGGVGHALLVPYFNAQNGNMTVLHVVNTDTSRGKA VKVRFRGAQNSDDILDFQVFMSPGDVWTAAVTAGSDGVAQLQTADGTCTLPALAKNVPQRFVTDRLNQGLATADLANQTR EGYVEIFNMADIPATLAGSNTTNPLYTAIKHVNGVAPCTSSALNATLQNFTTPAAVAAAGFDTPTTGLVGDWYIINVAQT TTFAGAATAIRAENGGAPAVGNFVHFPQMASNAATPDNFTADPLFRATNVFNAAGVAVTSPKIAAANYDLPDMSTPYTAN GGVAVSPLVQATNLTNALAVTSITNQYATDASISAKTDWLFSMPTRRYNVAANYAAANQSPADTSNVRLFTDLNGSGGVA DERFNPTNTSLQAVGGAICVNSTGQAFFDREEQTQTAGAVFSPGSVTQTRFCGETSVLSFASGSVLGASVASQQLTTGAY TNGWSRVDVPNNGLGLPILGASFIKLANPLASAGTSGTYGITWPHRFTRPAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54739; Mature: 54739
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNVLALSIAAMIGGLGFAGAASADVVVGATPLTATNATSLSFAEGGVGHALLVPYFNA CCCCEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEC QNGNMTVLHVVNTDTSRGKAVKVRFRGAQNSDDILDFQVFMSPGDVWTAAVTAGSDGVAQ CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEE LQTADGTCTLPALAKNVPQRFVTDRLNQGLATADLANQTREGYVEIFNMADIPATLAGSN EEECCCCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCEEECCCC TTNPLYTAIKHVNGVAPCTSSALNATLQNFTTPAAVAAAGFDTPTTGLVGDWYIINVAQT CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEEHH TTFAGAATAIRAENGGAPAVGNFVHFPQMASNAATPDNFTADPLFRATNVFNAAGVAVTS CEECCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC PKIAAANYDLPDMSTPYTANGGVAVSPLVQATNLTNALAVTSITNQYATDASISAKTDWL CCEEECCCCCCCCCCCEECCCCEEECCHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCEE FSMPTRRYNVAANYAAANQSPADTSNVRLFTDLNGSGGVADERFNPTNTSLQAVGGAICV EECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEE NSTGQAFFDREEQTQTAGAVFSPGSVTQTRFCGETSVLSFASGSVLGASVASQQLTTGAY CCCCCHHHCCHHHHHHCCCEECCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCCCC TNGWSRVDVPNNGLGLPILGASFIKLANPLASAGTSGTYGITWPHRFTRPAAQ CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCC >Mature Secondary Structure MKKNVLALSIAAMIGGLGFAGAASADVVVGATPLTATNATSLSFAEGGVGHALLVPYFNA CCCCEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEC QNGNMTVLHVVNTDTSRGKAVKVRFRGAQNSDDILDFQVFMSPGDVWTAAVTAGSDGVAQ CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEE LQTADGTCTLPALAKNVPQRFVTDRLNQGLATADLANQTREGYVEIFNMADIPATLAGSN EEECCCCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCEEECCCC TTNPLYTAIKHVNGVAPCTSSALNATLQNFTTPAAVAAAGFDTPTTGLVGDWYIINVAQT CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEEHH TTFAGAATAIRAENGGAPAVGNFVHFPQMASNAATPDNFTADPLFRATNVFNAAGVAVTS CEECCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC PKIAAANYDLPDMSTPYTANGGVAVSPLVQATNLTNALAVTSITNQYATDASISAKTDWL CCEEECCCCCCCCCCCEECCCCEEECCHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCEE FSMPTRRYNVAANYAAANQSPADTSNVRLFTDLNGSGGVADERFNPTNTSLQAVGGAICV EECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEE NSTGQAFFDREEQTQTAGAVFSPGSVTQTRFCGETSVLSFASGSVLGASVASQQLTTGAY CCCCCHHHCCHHHHHHCCCEECCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCCCC TNGWSRVDVPNNGLGLPILGASFIKLANPLASAGTSGTYGITWPHRFTRPAAQ CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA