Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612786
Identifier: 120612786
GI number: 120612786
Start: 4603173
End: 4603529
Strand: Reverse
Name: 120612786
Synonym: Aave_4149
Alternate gene names: NA
Gene position: 4603529-4603173 (Counterclockwise)
Preceding gene: 120612787
Following gene: 120612785
Centisome position: 86.0
GC content: 61.9
Gene sequence:
>357_bases TTGGCAGGGTGCGCTGCCCTGGCGCCTGCCACCCCCGAGCAGGCGGTGAAGGAGCGGGCTGAAGCGTATTGGAAGGCCCG CATGGCAGGGCAGTACGAGAAGACCTATGCGCTGACGCCTCCTTCTTACAGGGCGGCCGTCACCAAGGAGCAGTTCGCGC GGCAGTTCGGCAATGCTGCCTCGGTCACCGCGGCCGAGGTCACGAATGTGGAGTGCCAGCCGGAGAAGTGCGTCGCGAAG ATCAAGCTCACCGCCAAACCGATGATCATCGGCGTCAAACTCAACAGCATCGATACCTATCTTGACGAAACCTGGGTGCA GGAGGATGGGCAATGGTGGCGGTTCCAGGATCTTTGA
Upstream 100 bases:
>100_bases GCCTCCGCAGTGATGGATTCACTTATCATTTTTCCCTATGAACTTTAAAACTCTCATTCTCAAGTCGGGTTCGGCAAGCT TGGTCGCGGGTGCGATGCTC
Downstream 100 bases:
>100_bases TGCGTCCGAATGCCTTTAGGCATGCCTCCAGATGCCGACCTGTCAACTGAGCATCCAGCCAACGGCGCCCGGTCGCGCAT GCGCCGGGCGTTGCTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MAGCAALAPATPEQAVKERAEAYWKARMAGQYEKTYALTPPSYRAAVTKEQFARQFGNAASVTAAEVTNVECQPEKCVAK IKLTAKPMIIGVKLNSIDTYLDETWVQEDGQWWRFQDL
Sequences:
>Translated_118_residues MAGCAALAPATPEQAVKERAEAYWKARMAGQYEKTYALTPPSYRAAVTKEQFARQFGNAASVTAAEVTNVECQPEKCVAK IKLTAKPMIIGVKLNSIDTYLDETWVQEDGQWWRFQDL >Mature_117_residues AGCAALAPATPEQAVKERAEAYWKARMAGQYEKTYALTPPSYRAAVTKEQFARQFGNAASVTAAEVTNVECQPEKCVAKI KLTAKPMIIGVKLNSIDTYLDETWVQEDGQWWRFQDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13162; Mature: 13031
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGCAALAPATPEQAVKERAEAYWKARMAGQYEKTYALTPPSYRAAVTKEQFARQFGNAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCC SVTAAEVTNVECQPEKCVAKIKLTAKPMIIGVKLNSIDTYLDETWVQEDGQWWRFQDL CEEHHHHCCCCCCCCHHEEEEEEECCCEEEEEEECCHHHHHHHHHHCCCCCEEEECCC >Mature Secondary Structure AGCAALAPATPEQAVKERAEAYWKARMAGQYEKTYALTPPSYRAAVTKEQFARQFGNAA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCC SVTAAEVTNVECQPEKCVAKIKLTAKPMIIGVKLNSIDTYLDETWVQEDGQWWRFQDL CEEHHHHCCCCCCCCHHEEEEEEECCCEEEEEEECCHHHHHHHHHHCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA