Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612758
Identifier: 120612758
GI number: 120612758
Start: 4578574
End: 4579239
Strand: Direct
Name: 120612758
Synonym: Aave_4121
Alternate gene names: NA
Gene position: 4578574-4579239 (Clockwise)
Preceding gene: 120612757
Following gene: 120612759
Centisome position: 85.54
GC content: 72.22
Gene sequence:
>666_bases ATGACCCACCTCTGGCTTTGCCGAGACGCACTCGTCGCGCTGGGCCAGCACTTGGCACGCCGGCCGCGCGCATTCACCGT CGCCGAGCTGGTGGCATGGACGCCGAGCCTCGACACCAAAACGGGCCACCGTGCCTGCCAATTGCTGCAGACGGCCGGCA TGATCCAACCGGCGCCGCCCGCCGCAGGCGACACGCGCGCCAACCAGAACCCCTCTCGCCCCGCGGCATGGGAACTGACG GCATCGGGTCGGGAAGCGGCACGCGCTGCGCACCTGGAAGCGACGTCCAAGAAGCGCGCGGAAACCATGGCGGCGATCAA CCGCCGGCCGCGCACCGACGCGCTGCCCGCACGGCTCTGGACCGTGCTGCGCGCGCGCACCACCCTCACGGTCGATGAGG CCGCCGGGGTGCTGGGCGACGCCGGGGCCGACCTCCGACCGCTCAAGAAGGCGATCGGCAAGCTGCTCTCGGCCTGGCAT GCCGTGGCGCCCGACCTGGTCAAGGTCGGCGCGAGGCGCGTCGGCCGGGCCTACCAGTACGTGCTGGTGGGCAGCGCCGG GCGGTTTCCGCCGGAAGTCCACACGCCGGAGGCCGCCGAGCTCATCCGCGCGCATTCGGCGGCCAAGGCAGAGGCCAAGG CCAAGGCTGAGGAGGCGCATGCATGA
Upstream 100 bases:
>100_bases AGCGCATCACGCTCGAGCACGTCGCACGTCGCGCGCTCTGCACCGAATTCAGCGGCAAGAGCCTGGGCCGCCGCGCCCCC ACGCTGGGAGGTGACGCAGC
Downstream 100 bases:
>100_bases CCGAGCGTCCCTACATGCGGGAGTCCTGGTACGCGCTGCTCATGTCGAGGTGCGCGGGCGGCGTGACGCGCACGCTGATC GCCAAGCAGCTCGGGCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTHLWLCRDALVALGQHLARRPRAFTVAELVAWTPSLDTKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELT ASGREAARAAHLEATSKKRAETMAAINRRPRTDALPARLWTVLRARTTLTVDEAAGVLGDAGADLRPLKKAIGKLLSAWH AVAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAELIRAHSAAKAEAKAKAEEAHA
Sequences:
>Translated_221_residues MTHLWLCRDALVALGQHLARRPRAFTVAELVAWTPSLDTKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELT ASGREAARAAHLEATSKKRAETMAAINRRPRTDALPARLWTVLRARTTLTVDEAAGVLGDAGADLRPLKKAIGKLLSAWH AVAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAELIRAHSAAKAEAKAKAEEAHA >Mature_220_residues THLWLCRDALVALGQHLARRPRAFTVAELVAWTPSLDTKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELTA SGREAARAAHLEATSKKRAETMAAINRRPRTDALPARLWTVLRARTTLTVDEAAGVLGDAGADLRPLKKAIGKLLSAWHA VAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAELIRAHSAAKAEAKAKAEEAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23650; Mature: 23519
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLWLCRDALVALGQHLARRPRAFTVAELVAWTPSLDTKTGHRACQLLQTAGMIQPAPP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC AAGDTRANQNPSRPAAWELTASGREAARAAHLEATSKKRAETMAAINRRPRTDALPARLW CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TVLRARTTLTVDEAAGVLGDAGADLRPLKKAIGKLLSAWHAVAPDLVKVGARRVGRAYQY HHHHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VLVGSAGRFPPEVHTPEAAELIRAHSAAKAEAKAKAEEAHA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure THLWLCRDALVALGQHLARRPRAFTVAELVAWTPSLDTKTGHRACQLLQTAGMIQPAPP CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC AAGDTRANQNPSRPAAWELTASGREAARAAHLEATSKKRAETMAAINRRPRTDALPARLW CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TVLRARTTLTVDEAAGVLGDAGADLRPLKKAIGKLLSAWHAVAPDLVKVGARRVGRAYQY HHHHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VLVGSAGRFPPEVHTPEAAELIRAHSAAKAEAKAKAEEAHA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA