Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612759
Identifier: 120612759
GI number: 120612759
Start: 4579236
End: 4579679
Strand: Direct
Name: 120612759
Synonym: Aave_4122
Alternate gene names: NA
Gene position: 4579236-4579679 (Clockwise)
Preceding gene: 120612758
Following gene: 120612760
Centisome position: 85.55
GC content: 69.37
Gene sequence:
>444_bases ATGACCGAGCGTCCCTACATGCGGGAGTCCTGGTACGCGCTGCTCATGTCGAGGTGCGCGGGCGGCGTGACGCGCACGCT GATCGCCAAGCAGCTCGGGCTCTCCAGCACCACGATCTCGATGGTCATCAACGGCACCGGCCCCTACGGCGACGGCAAGG CCAGCACCGCGAAGGTTGCCGACCGGGTCGTGCACACGTTCGGCCGCTACGTCTGCCCGCACCTCACCGAGCAGGCCGGC GAGAGCCAGGTCATCACCGCCGAGGCATGCCGCGACTTCGCCCACTGCGAGCCACCCACCGGCCGGCCCCGCGCCATGCA GCACTGGCAGGCCTGCCGCAAGTGCCCGCACGCCGCTGCGAGTGCCCCGCCCATCGAGCGCGCCCCTGTGCCGCGCAAGG TGATCCCGATTCAACCCCAGGAGGCATCTGATGTCGCTTTTTAA
Upstream 100 bases:
>100_bases GGTTTCCGCCGGAAGTCCACACGCCGGAGGCCGCCGAGCTCATCCGCGCGCATTCGGCGGCCAAGGCAGAGGCCAAGGCC AAGGCTGAGGAGGCGCATGC
Downstream 100 bases:
>100_bases ATCCCTGCGTGAGCGGTGGCTCATGCACCGCTACCTGCGCACGCGCGTGCTGATGCAGCGCGAACGTTCCCTGCACCACA TGCACATGGCACAGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTERPYMRESWYALLMSRCAGGVTRTLIAKQLGLSSTTISMVINGTGPYGDGKASTAKVADRVVHTFGRYVCPHLTEQAG ESQVITAEACRDFAHCEPPTGRPRAMQHWQACRKCPHAAASAPPIERAPVPRKVIPIQPQEASDVAF
Sequences:
>Translated_147_residues MTERPYMRESWYALLMSRCAGGVTRTLIAKQLGLSSTTISMVINGTGPYGDGKASTAKVADRVVHTFGRYVCPHLTEQAG ESQVITAEACRDFAHCEPPTGRPRAMQHWQACRKCPHAAASAPPIERAPVPRKVIPIQPQEASDVAF >Mature_146_residues TERPYMRESWYALLMSRCAGGVTRTLIAKQLGLSSTTISMVINGTGPYGDGKASTAKVADRVVHTFGRYVCPHLTEQAGE SQVITAEACRDFAHCEPPTGRPRAMQHWQACRKCPHAAASAPPIERAPVPRKVIPIQPQEASDVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16007; Mature: 15875
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERPYMRESWYALLMSRCAGGVTRTLIAKQLGLSSTTISMVINGTGPYGDGKASTAKVA CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH DRVVHTFGRYVCPHLTEQAGESQVITAEACRDFAHCEPPTGRPRAMQHWQACRKCPHAAA HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC SAPPIERAPVPRKVIPIQPQEASDVAF CCCCCCCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure TERPYMRESWYALLMSRCAGGVTRTLIAKQLGLSSTTISMVINGTGPYGDGKASTAKVA CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH DRVVHTFGRYVCPHLTEQAGESQVITAEACRDFAHCEPPTGRPRAMQHWQACRKCPHAAA HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC SAPPIERAPVPRKVIPIQPQEASDVAF CCCCCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA