Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612757
Identifier: 120612757
GI number: 120612757
Start: 4577825
End: 4578577
Strand: Direct
Name: 120612757
Synonym: Aave_4120
Alternate gene names: NA
Gene position: 4577825-4578577 (Clockwise)
Preceding gene: 120612756
Following gene: 120612758
Centisome position: 85.52
GC content: 67.33
Gene sequence:
>753_bases ATGAAGACAGGGTTCGTCAAAACGGAGAATTTCCGCCGGTTGGCCGAGGCGCAGAAGCTGGTGGAGCGCCGCGGTGCGCG CGAAGCGGGCCTCGTGCTGGTCAAGGGGCCATATGGCATCGGCAAGTCCGAGCTGACGGAGCGCTGGGCCACCGACAGCG GCTGGATCTTCGTCCGCGCCAAGGCGACGTGGACGAAGCGCGCCATGCTCGATGAGCTGGCCGACCTGATGGGCGTATCG AAGACCGGGCGCAATCAGGAGGTGCAGGCCCGCATCATCGGCAAGCTGGCCGTGGACATGGTCCCCATGATCATCGACGA GGCCGACTTCCTCGTCGGCTCCACGGCAAGTCTGCTGGAGGTGGTGCGCGACATCACGGACATCACCGGCACCATGTGCT TCCTGGTGGGCATGGAGCAATTCGCGCTCAAGGTCGCGCGCCACGGCCACATCGCCAGCCGCGTGGGGAAGGTGGTCGAG CTGCAGCCGCTTTCGCTCGCGGACGTCAAGGCCACGGTCACAGCCAAGAGCCAGGTCGCCATCGACGACGCCGTGCTGCC GATCATCCTCGAGCAGAGCGCCGGCCGCATGCGCCTGGTGCTCGGCGCGATCGCCAACCTCGAAGCCTGGGCCGATGCCA ACCGCTGGGAGCGCATCACGCTCGAGCACGTCGCACGTCGCGCGCTCTGCACCGAATTCAGCGGCAAGAGCCTGGGCCGC CGCGCCCCCACGCTGGGAGGTGACGCAGCATGA
Upstream 100 bases:
>100_bases ATGGCCACGCGATCCCCAGCAGGTTTTTAAGGGTGCTCTGTGAGGCCCGCGTGAGCCGGTCGCAGAGCAGTGCAGCAGAT CAACGAAGAGGAATCACCCC
Downstream 100 bases:
>100_bases CCCACCTCTGGCTTTGCCGAGACGCACTCGTCGCGCTGGGCCAGCACTTGGCACGCCGGCCGCGCGCATTCACCGTCGCC GAGCTGGTGGCATGGACGCC
Product: bacteriophage DNA transposition B protein
Products: NA
Alternate protein names: Prophage MuSo1 DNA Transposition Protein; AAA ATPase Family Protein; Prophage; DNA Transposition Protein; AAA ATPase; Prophage Mu DNA Transposition Protein B
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKTGFVKTENFRRLAEAQKLVERRGAREAGLVLVKGPYGIGKSELTERWATDSGWIFVRAKATWTKRAMLDELADLMGVS KTGRNQEVQARIIGKLAVDMVPMIIDEADFLVGSTASLLEVVRDITDITGTMCFLVGMEQFALKVARHGHIASRVGKVVE LQPLSLADVKATVTAKSQVAIDDAVLPIILEQSAGRMRLVLGAIANLEAWADANRWERITLEHVARRALCTEFSGKSLGR RAPTLGGDAA
Sequences:
>Translated_250_residues MKTGFVKTENFRRLAEAQKLVERRGAREAGLVLVKGPYGIGKSELTERWATDSGWIFVRAKATWTKRAMLDELADLMGVS KTGRNQEVQARIIGKLAVDMVPMIIDEADFLVGSTASLLEVVRDITDITGTMCFLVGMEQFALKVARHGHIASRVGKVVE LQPLSLADVKATVTAKSQVAIDDAVLPIILEQSAGRMRLVLGAIANLEAWADANRWERITLEHVARRALCTEFSGKSLGR RAPTLGGDAA >Mature_250_residues MKTGFVKTENFRRLAEAQKLVERRGAREAGLVLVKGPYGIGKSELTERWATDSGWIFVRAKATWTKRAMLDELADLMGVS KTGRNQEVQARIIGKLAVDMVPMIIDEADFLVGSTASLLEVVRDITDITGTMCFLVGMEQFALKVARHGHIASRVGKVVE LQPLSLADVKATVTAKSQVAIDDAVLPIILEQSAGRMRLVLGAIANLEAWADANRWERITLEHVARRALCTEFSGKSLGR RAPTLGGDAA
Specific function: Unknown
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27269; Mature: 27269
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGFVKTENFRRLAEAQKLVERRGAREAGLVLVKGPYGIGKSELTERWATDSGWIFVRA CCCCCCCCHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHHCCCCCEEEEEE KATWTKRAMLDELADLMGVSKTGRNQEVQARIIGKLAVDMVPMIIDEADFLVGSTASLLE ECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH VVRDITDITGTMCFLVGMEQFALKVARHGHIASRVGKVVELQPLSLADVKATVTAKSQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHCEEEEECCCHHH IDDAVLPIILEQSAGRMRLVLGAIANLEAWADANRWERITLEHVARRALCTEFSGKSLGR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCCCCCCCC RAPTLGGDAA CCCCCCCCCC >Mature Secondary Structure MKTGFVKTENFRRLAEAQKLVERRGAREAGLVLVKGPYGIGKSELTERWATDSGWIFVRA CCCCCCCCHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHHCCCCCEEEEEE KATWTKRAMLDELADLMGVSKTGRNQEVQARIIGKLAVDMVPMIIDEADFLVGSTASLLE ECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH VVRDITDITGTMCFLVGMEQFALKVARHGHIASRVGKVVELQPLSLADVKATVTAKSQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHCEEEEECCCHHH IDDAVLPIILEQSAGRMRLVLGAIANLEAWADANRWERITLEHVARRALCTEFSGKSLGR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCCCCCCCC RAPTLGGDAA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA