Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612742
Identifier: 120612742
GI number: 120612742
Start: 4563224
End: 4563493
Strand: Reverse
Name: 120612742
Synonym: Aave_4105
Alternate gene names: NA
Gene position: 4563493-4563224 (Counterclockwise)
Preceding gene: 120612743
Following gene: 120612741
Centisome position: 85.25
GC content: 66.67
Gene sequence:
>270_bases ATGTCCGATACCAAAAGCCCGGCCGAGCAGCCGGCCGCACTCAAAGAACTGACCTACGCCGAGGCCGCCAAGCGCGTACA GCGCAAGGTGGTCGAGCGCGTCGAGGCCAAAGGCGAAGACGGAAAGCCCGTCACGCAGGCGCGCGAAAAGCGCGTGGCCG TGAAGGCCGATGAGGTGCTGTCCTTCCGCGACTATGGCACCCATGTCGTGGTCGTCACGCGCGACGGCGCGAAGCTCTCC AGCCTCGATGCGGAAGCCGCGGCGCGATGA
Upstream 100 bases:
>100_bases TGAAAGGCCGACGCATGTCGGCCTTAGTTTTTTGGTGCCCCCCCGGCACAGTCACTCCACCGCCGCCGCGCCTGTGCGGC CTACCTGGATGGAGTGATGC
Downstream 100 bases:
>100_bases TCAAGCTCCTGCCCGCCGGCACCGGCTATGCGCGCCTCACCGAGGCCGTCACGACCGAGTACGGCCAGCTTATCGACCTC GTGCGGCAGGCCGTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSDTKSPAEQPAALKELTYAEAAKRVQRKVVERVEAKGEDGKPVTQAREKRVAVKADEVLSFRDYGTHVVVVTRDGAKLS SLDAEAAAR
Sequences:
>Translated_89_residues MSDTKSPAEQPAALKELTYAEAAKRVQRKVVERVEAKGEDGKPVTQAREKRVAVKADEVLSFRDYGTHVVVVTRDGAKLS SLDAEAAAR >Mature_88_residues SDTKSPAEQPAALKELTYAEAAKRVQRKVVERVEAKGEDGKPVTQAREKRVAVKADEVLSFRDYGTHVVVVTRDGAKLSS LDAEAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9682; Mature: 9551
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTKSPAEQPAALKELTYAEAAKRVQRKVVERVEAKGEDGKPVTQAREKRVAVKADEVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH SFRDYGTHVVVVTRDGAKLSSLDAEAAAR HHCCCCCEEEEEECCCCCCCCCCCHHCCC >Mature Secondary Structure SDTKSPAEQPAALKELTYAEAAKRVQRKVVERVEAKGEDGKPVTQAREKRVAVKADEVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH SFRDYGTHVVVVTRDGAKLSSLDAEAAAR HHCCCCCEEEEEECCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA