Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612741
Identifier: 120612741
GI number: 120612741
Start: 4560885
End: 4563227
Strand: Reverse
Name: 120612741
Synonym: Aave_4104
Alternate gene names: NA
Gene position: 4563227-4560885 (Counterclockwise)
Preceding gene: 120612742
Following gene: 120612740
Centisome position: 85.25
GC content: 67.31
Gene sequence:
>2343_bases ATGATCAAGCTCCTGCCCGCCGGCACCGGCTATGCGCGCCTCACCGAGGCCGTCACGACCGAGTACGGCCAGCTTATCGA CCTCGTGCGGCAGGCCGTGCGCGACAAGCTGCGCCTGACGGCCAACAGCGACTACTACGTGGACGTGCGCGGCATCTGGC CCGAGCGCGTCGTGGTCGGCTACAAGGGGCGGCTCTACAGCTACCCCTACACCATCGCCCAGGACAACACCGTCGCGGTT GGTGACGCTGCCGAAGTGGTCGCCGAATACAACCCCGTGGGTGCGGCATCAGCGCCTGCTGCGGCGCCGGCCACCGCTGC GGCCGTGCGCGAGGCTGTGGGGCAGGACGTCACCGCGCAGTTCTGCGAAGCCAAGGATGGCTCCATCGAGGTCACGCTGA TCCGAGCAGGCCGCAGCGGCAACCGCAACTACTACCCGGATGCGACGCTGCGCGAGGCCGCATCCATGTTCGATGGCGTA CGCGTGTTCGCCAAGTCGGACGCCGATCACATCGCCGGCAAGGGCAAGGACGTCCGCAACCTGATCGGCGGCATCTACGG CGTGCGCTTCGTGGAAGGACAGACGCCCGACACGGGCGCTCTGGTGGGCACGTTCAAGCCACTCAACCCCAGCGATGCCG CGGTCATGAAGATGACCGAGGCCGTCAAGCGCGGCATGCAGAGCCTGCTGGGCCTTTCCATCGACGCCACCGCGCGCACC AAGCCGCGAAAGGCGGGCGCCGAGCAGCTGCGCGAGGCAGTGAAGTTCCTGAAGGTGGACTCCGTCGATCTGATCGTCGA GCCGGGCGCTGGTGGCGGCCTGGATCGCCTCGTAGAAGCCGCCACCGATTCGATCAACTCTCAAGGAAACGCAATGCCTC TCTGGAAGCAACGCATGCTGGAGGCCATCAAGGCCAAAGACCCGGTGAAGCACGCCGCCGTGAACGTGGAGACCGCCACC GACGACGAAGTGACCCAGCTCTACGAAGCCGTGTGCGGCCCCCTGGTGCCGCAGCCCGGCACCCACCGCGTCGCAGAAGC GCAGGACGCGCCGCTGACGCGGGCCGATCTGCAGGTGTTCGAGCTGCGCGGCGCTGCGCGCGATCGCATCACCGCGGCCA AGCTCCCGCAGGTCGCCAAAGATCGCCTGCAGACGCAGATCGCGACCGCGGGCGCTGACCGGCTGACCGAGGCCGCAGTG GGCGAGCTGATCAAGGCCGAGGGCGACTACATCGCACGCATGACCGAGAGCGGCGCCGTGCGTGTGCCGCTGTTCGGCGA GGGCTCCATCCAGGTGGGCGACCGCAGCCTGACCATGCGGGAGATGCTCGACGCGTTCTGGGACCCCAAGCACAAGGATC ACGGTCGGGTGCAGTCCATCAAGGAGTGCTACATCGAGATGACGGGCGACCGCCTGGTCACCGGCCGCGTGCGCGACTGC GACCGATCTCGCCTGGCCGAGTCGCTCGGCTCCGATACGCTCGACCAGGTGCTGGGTGACAGCATCACCCGGCGCATGCT GGCCGAGTACCGCTCCGCGGTGGACTTCGACGGCTGGCGCCAGGTGGTCAACGTGGTGCCCGTGAGCGACTTCCGGGTGC AGCACCGCACGCGCTGGGGTGGCTACGGCGATCTGCCCAAGGTGGCAGAGGGCGCCGACTACCTGCCGCTCACGAGCCCC ACCGACGAAGAGGCCACGTACAAGGCCGAAAAGCGCGGGGGCATCGAGGAGCTGACTCTCGAGATGATCAAGAACGACGA CGTGGGCACCGTCCGCCGCATCCCCACCAAGCTCTCACGCGCCGCCAAGCGCACGCTCGCCAAGTTCGCGTTCGACTTCC TGCGCTCCAACCCCGTGATCTACGACGGCAAGGCGCTGTTCCACGCCGACCACGGGAACCTGTTCACCGCTGGGCTGGAC AAGACGTCTCTCGCCGCTCACCGGCTGGCGATGCTCAAGCAGAGCGAGCTGTCGAGCAACGACCGCATCGGCATCACGCC CACGCGCCTGGTCGTGCCCGTCGAGCTGCAGGAAGCCGCCGTGGACCTGTTCCGCCTGGCGACCAACAACGAGAAGACGT TCATCCAGTCGCTGGTGATGAACATCATCCCGGTGTGGTACTGGACTGATGCCAACGACTGGTGCACTGCTGCCGACCCG GCCGACATCCCCGGCATCGAGCTGGGCTTCCTGGATGGCCGCGAAGAGCCCGAGCTGTTCGTACAGGACTCGCCGACCGT GGGCTCCATGTTCGCGGCCGACAAGCTCACCTACAAGATCCGCCACATCTACGGCGGCGCGGTCACCGACTACCGCGCCT TCACCAAGGCCGTGGTGGCCTGA
Upstream 100 bases:
>100_bases CCGATGAGGTGCTGTCCTTCCGCGACTATGGCACCCATGTCGTGGTCGTCACGCGCGACGGCGCGAAGCTCTCCAGCCTC GATGCGGAAGCCGCGGCGCG
Downstream 100 bases:
>100_bases TCGGCCTTCCTTCGACCCGCCCCATCCGGGGTGGGTTGGCAAAGGCGCTGCCCTCCAGCGGAGCCTTTGCCAACCCCGCC GACCACCTCCCAAGCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease; Protease Subunit Of ATP-Dependent Clp Protease; ATP-Dependent Clp Protease Proteolytic Subunit; ATP Dependent Clp Protease; U35 Peptidase Phage Protease Prohead HK; Clp Protease; Caudovirus Prohead Protease; Clp-Like Protease; U35 Family Peptidase; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Endopeptidase Clp; Phage Portal Protein Lambda Family; Protease; Phage Protease; Prophage Clp Protease-Like Protein
Number of amino acids: Translated: 780; Mature: 780
Protein sequence:
>780_residues MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA
Sequences:
>Translated_780_residues MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA >Mature_780_residues MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85046; Mature: 85046
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVG CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEE YKGRLYSYPYTIAQDNTVAVGDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQ CCCEEEECCEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH FCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGVRVFAKSDADHIAGKGKDVRN HHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHCCCCCHHHH LIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART HHHHHHHEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRML CCHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH EAIKAKDPVKHAAVNVETATDDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVF HHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAVGELIKAEGDYIARMTESGAV HHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCE RVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC EEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC GYGDLPKVAEGADYLPLTSPTDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSR CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLDKTSLAAHRLAMLKQSELSSN HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC DRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA CCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVG CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEE YKGRLYSYPYTIAQDNTVAVGDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQ CCCEEEECCEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH FCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGVRVFAKSDADHIAGKGKDVRN HHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHCCCCCHHHH LIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART HHHHHHHEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRML CCHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH EAIKAKDPVKHAAVNVETATDDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVF HHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAVGELIKAEGDYIARMTESGAV HHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCE RVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC EEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC GYGDLPKVAEGADYLPLTSPTDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSR CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLDKTSLAAHRLAMLKQSELSSN HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC DRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA CCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA