Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612741

Identifier: 120612741

GI number: 120612741

Start: 4560885

End: 4563227

Strand: Reverse

Name: 120612741

Synonym: Aave_4104

Alternate gene names: NA

Gene position: 4563227-4560885 (Counterclockwise)

Preceding gene: 120612742

Following gene: 120612740

Centisome position: 85.25

GC content: 67.31

Gene sequence:

>2343_bases
ATGATCAAGCTCCTGCCCGCCGGCACCGGCTATGCGCGCCTCACCGAGGCCGTCACGACCGAGTACGGCCAGCTTATCGA
CCTCGTGCGGCAGGCCGTGCGCGACAAGCTGCGCCTGACGGCCAACAGCGACTACTACGTGGACGTGCGCGGCATCTGGC
CCGAGCGCGTCGTGGTCGGCTACAAGGGGCGGCTCTACAGCTACCCCTACACCATCGCCCAGGACAACACCGTCGCGGTT
GGTGACGCTGCCGAAGTGGTCGCCGAATACAACCCCGTGGGTGCGGCATCAGCGCCTGCTGCGGCGCCGGCCACCGCTGC
GGCCGTGCGCGAGGCTGTGGGGCAGGACGTCACCGCGCAGTTCTGCGAAGCCAAGGATGGCTCCATCGAGGTCACGCTGA
TCCGAGCAGGCCGCAGCGGCAACCGCAACTACTACCCGGATGCGACGCTGCGCGAGGCCGCATCCATGTTCGATGGCGTA
CGCGTGTTCGCCAAGTCGGACGCCGATCACATCGCCGGCAAGGGCAAGGACGTCCGCAACCTGATCGGCGGCATCTACGG
CGTGCGCTTCGTGGAAGGACAGACGCCCGACACGGGCGCTCTGGTGGGCACGTTCAAGCCACTCAACCCCAGCGATGCCG
CGGTCATGAAGATGACCGAGGCCGTCAAGCGCGGCATGCAGAGCCTGCTGGGCCTTTCCATCGACGCCACCGCGCGCACC
AAGCCGCGAAAGGCGGGCGCCGAGCAGCTGCGCGAGGCAGTGAAGTTCCTGAAGGTGGACTCCGTCGATCTGATCGTCGA
GCCGGGCGCTGGTGGCGGCCTGGATCGCCTCGTAGAAGCCGCCACCGATTCGATCAACTCTCAAGGAAACGCAATGCCTC
TCTGGAAGCAACGCATGCTGGAGGCCATCAAGGCCAAAGACCCGGTGAAGCACGCCGCCGTGAACGTGGAGACCGCCACC
GACGACGAAGTGACCCAGCTCTACGAAGCCGTGTGCGGCCCCCTGGTGCCGCAGCCCGGCACCCACCGCGTCGCAGAAGC
GCAGGACGCGCCGCTGACGCGGGCCGATCTGCAGGTGTTCGAGCTGCGCGGCGCTGCGCGCGATCGCATCACCGCGGCCA
AGCTCCCGCAGGTCGCCAAAGATCGCCTGCAGACGCAGATCGCGACCGCGGGCGCTGACCGGCTGACCGAGGCCGCAGTG
GGCGAGCTGATCAAGGCCGAGGGCGACTACATCGCACGCATGACCGAGAGCGGCGCCGTGCGTGTGCCGCTGTTCGGCGA
GGGCTCCATCCAGGTGGGCGACCGCAGCCTGACCATGCGGGAGATGCTCGACGCGTTCTGGGACCCCAAGCACAAGGATC
ACGGTCGGGTGCAGTCCATCAAGGAGTGCTACATCGAGATGACGGGCGACCGCCTGGTCACCGGCCGCGTGCGCGACTGC
GACCGATCTCGCCTGGCCGAGTCGCTCGGCTCCGATACGCTCGACCAGGTGCTGGGTGACAGCATCACCCGGCGCATGCT
GGCCGAGTACCGCTCCGCGGTGGACTTCGACGGCTGGCGCCAGGTGGTCAACGTGGTGCCCGTGAGCGACTTCCGGGTGC
AGCACCGCACGCGCTGGGGTGGCTACGGCGATCTGCCCAAGGTGGCAGAGGGCGCCGACTACCTGCCGCTCACGAGCCCC
ACCGACGAAGAGGCCACGTACAAGGCCGAAAAGCGCGGGGGCATCGAGGAGCTGACTCTCGAGATGATCAAGAACGACGA
CGTGGGCACCGTCCGCCGCATCCCCACCAAGCTCTCACGCGCCGCCAAGCGCACGCTCGCCAAGTTCGCGTTCGACTTCC
TGCGCTCCAACCCCGTGATCTACGACGGCAAGGCGCTGTTCCACGCCGACCACGGGAACCTGTTCACCGCTGGGCTGGAC
AAGACGTCTCTCGCCGCTCACCGGCTGGCGATGCTCAAGCAGAGCGAGCTGTCGAGCAACGACCGCATCGGCATCACGCC
CACGCGCCTGGTCGTGCCCGTCGAGCTGCAGGAAGCCGCCGTGGACCTGTTCCGCCTGGCGACCAACAACGAGAAGACGT
TCATCCAGTCGCTGGTGATGAACATCATCCCGGTGTGGTACTGGACTGATGCCAACGACTGGTGCACTGCTGCCGACCCG
GCCGACATCCCCGGCATCGAGCTGGGCTTCCTGGATGGCCGCGAAGAGCCCGAGCTGTTCGTACAGGACTCGCCGACCGT
GGGCTCCATGTTCGCGGCCGACAAGCTCACCTACAAGATCCGCCACATCTACGGCGGCGCGGTCACCGACTACCGCGCCT
TCACCAAGGCCGTGGTGGCCTGA

Upstream 100 bases:

>100_bases
CCGATGAGGTGCTGTCCTTCCGCGACTATGGCACCCATGTCGTGGTCGTCACGCGCGACGGCGCGAAGCTCTCCAGCCTC
GATGCGGAAGCCGCGGCGCG

Downstream 100 bases:

>100_bases
TCGGCCTTCCTTCGACCCGCCCCATCCGGGGTGGGTTGGCAAAGGCGCTGCCCTCCAGCGGAGCCTTTGCCAACCCCGCC
GACCACCTCCCAAGCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease; Protease Subunit Of ATP-Dependent Clp Protease; ATP-Dependent Clp Protease Proteolytic Subunit; ATP Dependent Clp Protease; U35 Peptidase Phage Protease Prohead HK; Clp Protease; Caudovirus Prohead Protease; Clp-Like Protease; U35 Family Peptidase; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Endopeptidase Clp; Phage Portal Protein Lambda Family; Protease; Phage Protease; Prophage Clp Protease-Like Protein

Number of amino acids: Translated: 780; Mature: 780

Protein sequence:

>780_residues
MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV
GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV
RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART
KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT
DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV
GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC
DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP
TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD
KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP
ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA

Sequences:

>Translated_780_residues
MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV
GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV
RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART
KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT
DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV
GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC
DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP
TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD
KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP
ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA
>Mature_780_residues
MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVGYKGRLYSYPYTIAQDNTVAV
GDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQFCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGV
RVFAKSDADHIAGKGKDVRNLIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART
KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRMLEAIKAKDPVKHAAVNVETAT
DDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVFELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAV
GELIKAEGDYIARMTESGAVRVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC
DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWGGYGDLPKVAEGADYLPLTSP
TDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSRAAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLD
KTSLAAHRLAMLKQSELSSNDRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP
ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85046; Mature: 85046

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVG
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEE
YKGRLYSYPYTIAQDNTVAVGDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQ
CCCEEEECCEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
FCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGVRVFAKSDADHIAGKGKDVRN
HHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHCCCCCHHHH
LIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART
HHHHHHHEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRML
CCHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
EAIKAKDPVKHAAVNVETATDDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVF
HHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAVGELIKAEGDYIARMTESGAV
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCE
RVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC
EEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC
GYGDLPKVAEGADYLPLTSPTDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSR
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
AAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLDKTSLAAHRLAMLKQSELSSN
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
DRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP
CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC
ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA
CCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLLPAGTGYARLTEAVTTEYGQLIDLVRQAVRDKLRLTANSDYYVDVRGIWPERVVVG
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEE
YKGRLYSYPYTIAQDNTVAVGDAAEVVAEYNPVGAASAPAAAPATAAAVREAVGQDVTAQ
CCCEEEECCEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
FCEAKDGSIEVTLIRAGRSGNRNYYPDATLREAASMFDGVRVFAKSDADHIAGKGKDVRN
HHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHCCCCCHHHH
LIGGIYGVRFVEGQTPDTGALVGTFKPLNPSDAAVMKMTEAVKRGMQSLLGLSIDATART
HHHHHHHEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KPRKAGAEQLREAVKFLKVDSVDLIVEPGAGGGLDRLVEAATDSINSQGNAMPLWKQRML
CCHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
EAIKAKDPVKHAAVNVETATDDEVTQLYEAVCGPLVPQPGTHRVAEAQDAPLTRADLQVF
HHHHCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ELRGAARDRITAAKLPQVAKDRLQTQIATAGADRLTEAAVGELIKAEGDYIARMTESGAV
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCE
RVPLFGEGSIQVGDRSLTMREMLDAFWDPKHKDHGRVQSIKECYIEMTGDRLVTGRVRDC
EEEEECCCCEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
DRSRLAESLGSDTLDQVLGDSITRRMLAEYRSAVDFDGWRQVVNVVPVSDFRVQHRTRWG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC
GYGDLPKVAEGADYLPLTSPTDEEATYKAEKRGGIEELTLEMIKNDDVGTVRRIPTKLSR
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
AAKRTLAKFAFDFLRSNPVIYDGKALFHADHGNLFTAGLDKTSLAAHRLAMLKQSELSSN
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
DRIGITPTRLVVPVELQEAAVDLFRLATNNEKTFIQSLVMNIIPVWYWTDANDWCTAADP
CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC
ADIPGIELGFLDGREEPELFVQDSPTVGSMFAADKLTYKIRHIYGGAVTDYRAFTKAVVA
CCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA