Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612743
Identifier: 120612743
GI number: 120612743
Start: 4563618
End: 4564685
Strand: Reverse
Name: 120612743
Synonym: Aave_4106
Alternate gene names: NA
Gene position: 4564685-4563618 (Counterclockwise)
Preceding gene: 120612744
Following gene: 120612742
Centisome position: 85.28
GC content: 52.72
Gene sequence:
>1068_bases ATGGCGGTCATTCAAAGTTATGCAGTCTGGAACAACAAGGGTGGGGTCGGCAAGAGCACGATCACCTTTCATGCCGCGTC TCGGTATGCAGAGTTGAATCCGGACAAAAAGGTGCTCGTGATTGATCTCTGTCCGCAGTCCAACTCCAGCATGATGTTGC TCGGAGGTGGTGTAGGCGGGGAGAACAGCGTGCTCAACCTCTGTACACAACCGGTTCCTAAGACAGTAGTTGGATATCTC AGCACTGTCATCGCGCAAGGTGCTGGGGCTCCGCTACCCAAGCCTGCTGACTTCATCGTGCAGGCCTCGAGCTACAACAG TTCGTTGCCCGGGAACATTTTTCTTCTATGCGGCGATGGCAATTTGGAGCCGATGTCTCCTGCCATTTCTCAGGCAGCAG CAGCTCCAGCCCTTACGCCTTCTAGCAAACCTTGGAACTGGATTCACTCGATCTTCAAGAATTTCATAGCTTCGGTAGAA AAAGCAGATGCGTCGGACTGGATGGTTTTTATTGATACCAATCCAAGCTTCGCTATTTACACAGAGTTGGCTGTCTCGGC TGCAACTCGGCTGATCACGCCGGTCAATGCGGATGATTCCTCGCGCGTAGCGGCGAATGCAATGTTGATCTTGCTTCATG GTCAAACGCCGCCTCATCCTATTTACGGAGCTTGGACCTATGCTGTCCAAGCGCATGCTCATGGTTTGCCAATCCCACAA ATTCATGTGGTTGTCGGAAATCGGCTGACGCAGCACGGGGGGGCTGCTAGAGCATTCGAGGCGCTTTCTGATGCCACTTC AGATACGCTCTACAAGGCTTACCAAACGCACCCGGGGTACTTTGTTCCTAGGCAGATTCCGCCGAAAAATCTGGAGGAAT TCCGCGCGTCTTTCTCAATCGCTCTGAGAGACTTCAACACTGCAGGAGTTGTCGCTGCTCATCTAGGGAAGCCGTTGTCC AAATTGACTCAAGGCTACTACAAGGTGCATGGAGATGACGTGTATGTGAACGGGGACCGTGTGGCCGAGTGCATGAAGGC AGTTGATAACATGTGTGCGGGGCTCTAG
Upstream 100 bases:
>100_bases AGGCCGGGACTATCGGGCCTTCACGAAGGTTTTAAAAGGCGTTTAAAAGCATCCGAAGCTGATAGACTGGCCTACCACAG CAAAGAAGAGGGATGGATCT
Downstream 100 bases:
>100_bases TTTCAATTAATAAAAGTGGGTATATGAAAGGCCGACGCATGTCGGCCTTAGTTTTTTGGTGCCCCCCCGGCACAGTCACT CCACCGCCGCCGCGCCTGTG
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: ATPase; ATPase Domain Protein; Chromosome Partitioning ATPase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MAVIQSYAVWNNKGGVGKSTITFHAASRYAELNPDKKVLVIDLCPQSNSSMMLLGGGVGGENSVLNLCTQPVPKTVVGYL STVIAQGAGAPLPKPADFIVQASSYNSSLPGNIFLLCGDGNLEPMSPAISQAAAAPALTPSSKPWNWIHSIFKNFIASVE KADASDWMVFIDTNPSFAIYTELAVSAATRLITPVNADDSSRVAANAMLILLHGQTPPHPIYGAWTYAVQAHAHGLPIPQ IHVVVGNRLTQHGGAARAFEALSDATSDTLYKAYQTHPGYFVPRQIPPKNLEEFRASFSIALRDFNTAGVVAAHLGKPLS KLTQGYYKVHGDDVYVNGDRVAECMKAVDNMCAGL
Sequences:
>Translated_355_residues MAVIQSYAVWNNKGGVGKSTITFHAASRYAELNPDKKVLVIDLCPQSNSSMMLLGGGVGGENSVLNLCTQPVPKTVVGYL STVIAQGAGAPLPKPADFIVQASSYNSSLPGNIFLLCGDGNLEPMSPAISQAAAAPALTPSSKPWNWIHSIFKNFIASVE KADASDWMVFIDTNPSFAIYTELAVSAATRLITPVNADDSSRVAANAMLILLHGQTPPHPIYGAWTYAVQAHAHGLPIPQ IHVVVGNRLTQHGGAARAFEALSDATSDTLYKAYQTHPGYFVPRQIPPKNLEEFRASFSIALRDFNTAGVVAAHLGKPLS KLTQGYYKVHGDDVYVNGDRVAECMKAVDNMCAGL >Mature_354_residues AVIQSYAVWNNKGGVGKSTITFHAASRYAELNPDKKVLVIDLCPQSNSSMMLLGGGVGGENSVLNLCTQPVPKTVVGYLS TVIAQGAGAPLPKPADFIVQASSYNSSLPGNIFLLCGDGNLEPMSPAISQAAAAPALTPSSKPWNWIHSIFKNFIASVEK ADASDWMVFIDTNPSFAIYTELAVSAATRLITPVNADDSSRVAANAMLILLHGQTPPHPIYGAWTYAVQAHAHGLPIPQI HVVVGNRLTQHGGAARAFEALSDATSDTLYKAYQTHPGYFVPRQIPPKNLEEFRASFSIALRDFNTAGVVAAHLGKPLSK LTQGYYKVHGDDVYVNGDRVAECMKAVDNMCAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37807; Mature: 37676
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIQSYAVWNNKGGVGKSTITFHAASRYAELNPDKKVLVIDLCPQSNSSMMLLGGGVGG CCEEEEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCC ENSVLNLCTQPVPKTVVGYLSTVIAQGAGAPLPKPADFIVQASSYNSSLPGNIFLLCGDG CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCC NLEPMSPAISQAAAAPALTPSSKPWNWIHSIFKNFIASVEKADASDWMVFIDTNPSFAIY CCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE TELAVSAATRLITPVNADDSSRVAANAMLILLHGQTPPHPIYGAWTYAVQAHAHGLPIPQ HHHHHHHHHHHEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCE IHVVVGNRLTQHGGAARAFEALSDATSDTLYKAYQTHPGYFVPRQIPPKNLEEFRASFSI EEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHEE ALRDFNTAGVVAAHLGKPLSKLTQGYYKVHGDDVYVNGDRVAECMKAVDNMCAGL EEECCCCHHHHHHHHCCCHHHHHCCCEEECCCEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVIQSYAVWNNKGGVGKSTITFHAASRYAELNPDKKVLVIDLCPQSNSSMMLLGGGVGG CEEEEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCC ENSVLNLCTQPVPKTVVGYLSTVIAQGAGAPLPKPADFIVQASSYNSSLPGNIFLLCGDG CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCC NLEPMSPAISQAAAAPALTPSSKPWNWIHSIFKNFIASVEKADASDWMVFIDTNPSFAIY CCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE TELAVSAATRLITPVNADDSSRVAANAMLILLHGQTPPHPIYGAWTYAVQAHAHGLPIPQ HHHHHHHHHHHEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCE IHVVVGNRLTQHGGAARAFEALSDATSDTLYKAYQTHPGYFVPRQIPPKNLEEFRASFSI EEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHEE ALRDFNTAGVVAAHLGKPLSKLTQGYYKVHGDDVYVNGDRVAECMKAVDNMCAGL EEECCCCHHHHHHHHCCCHHHHHCCCEEECCCEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA