Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612740
Identifier: 120612740
GI number: 120612740
Start: 4560096
End: 4560779
Strand: Reverse
Name: 120612740
Synonym: Aave_4103
Alternate gene names: NA
Gene position: 4560779-4560096 (Counterclockwise)
Preceding gene: 120612741
Following gene: 120612739
Centisome position: 85.2
GC content: 71.78
Gene sequence:
>684_bases ATGGCCCTGGCCGACATCACTGCGCTGCTCGACGACCTCGCCCGAGACCAGGGCTCCATCCTGGCGCCCGAGGTCCGAGT GCGCGCCTTGGAGGCCGCGCGGCTGCAGTACAGCAGCGACCACCCTCGCGCGCTGCCCGAGGACTTGACCTGGCTGCCCG ACTCGGTCGGCCCCAAGCCCACGGCCTGGACGGAGCACGCCTGGATCAAGTCGGCCGAGTACCCCATCGGCCGCGATCCG GTGTCGCTGATCGACGTGTCTGCCTACCTGGGACCATCCGGGACGCAGCTCCTCGCGGCGACCTACGTGCCGGCCGGCGC GGAGGTGCGCGTGACGATCATGGCCGAGCACGAGCTGTCTGCCACGGCCGATACCATCCCAGCCCGCCACCGATTGCCGG TGGCGCAGTACGCAGCCCACCTGCTGTGCCACCAGCTCGCCACCCACTACAGCGCGCAGCGCGAGGCCGCGATGGGCTCG GATGCGAGCATGACCGAGTCCCGCGCCCGCCAGTTCGCGGATCGTGCCCGAGAGCTGCGCACGGCGTACTTCGCCGGGGT TGGATTGCCCGACCCCTTCAAGGCTGGTGGCACGGCGAGCGCGCCCGGCGCTGCGGCCGCCGCGGTCGTGAGCTGGCCGT CGCGCAACCCGCGCTACAGCCTGGTGAGGAGAGGCCTGCTGTGA
Upstream 100 bases:
>100_bases CTTCCTTCGACCCGCCCCATCCGGGGTGGGTTGGCAAAGGCGCTGCCCTCCAGCGGAGCCTTTGCCAACCCCGCCGACCA CCTCCCAAGCACCGACCCTC
Downstream 100 bases:
>100_bases ACCTGTCGATCAACATGGGCTCGCTCCAGTCGTTCGTGCGGGGGCTGCGCGAGGCGCCCGAGTACACCGACCAAGTGCTC CTCTCTGCGATGACGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MALADITALLDDLARDQGSILAPEVRVRALEAARLQYSSDHPRALPEDLTWLPDSVGPKPTAWTEHAWIKSAEYPIGRDP VSLIDVSAYLGPSGTQLLAATYVPAGAEVRVTIMAEHELSATADTIPARHRLPVAQYAAHLLCHQLATHYSAQREAAMGS DASMTESRARQFADRARELRTAYFAGVGLPDPFKAGGTASAPGAAAAAVVSWPSRNPRYSLVRRGLL
Sequences:
>Translated_227_residues MALADITALLDDLARDQGSILAPEVRVRALEAARLQYSSDHPRALPEDLTWLPDSVGPKPTAWTEHAWIKSAEYPIGRDP VSLIDVSAYLGPSGTQLLAATYVPAGAEVRVTIMAEHELSATADTIPARHRLPVAQYAAHLLCHQLATHYSAQREAAMGS DASMTESRARQFADRARELRTAYFAGVGLPDPFKAGGTASAPGAAAAAVVSWPSRNPRYSLVRRGLL >Mature_226_residues ALADITALLDDLARDQGSILAPEVRVRALEAARLQYSSDHPRALPEDLTWLPDSVGPKPTAWTEHAWIKSAEYPIGRDPV SLIDVSAYLGPSGTQLLAATYVPAGAEVRVTIMAEHELSATADTIPARHRLPVAQYAAHLLCHQLATHYSAQREAAMGSD ASMTESRARQFADRARELRTAYFAGVGLPDPFKAGGTASAPGAAAAAVVSWPSRNPRYSLVRRGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24347; Mature: 24216
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALADITALLDDLARDQGSILAPEVRVRALEAARLQYSSDHPRALPEDLTWLPDSVGPKP CCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC TAWTEHAWIKSAEYPIGRDPVSLIDVSAYLGPSGTQLLAATYVPAGAEVRVTIMAEHELS CCCCCHHHHCCCCCCCCCCCHHHEEHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCH ATADTIPARHRLPVAQYAAHLLCHQLATHYSAQREAAMGSDASMTESRARQFADRARELR HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TAYFAGVGLPDPFKAGGTASAPGAAAAAVVSWPSRNPRYSLVRRGLL HHHHHCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHCCC >Mature Secondary Structure ALADITALLDDLARDQGSILAPEVRVRALEAARLQYSSDHPRALPEDLTWLPDSVGPKP CHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC TAWTEHAWIKSAEYPIGRDPVSLIDVSAYLGPSGTQLLAATYVPAGAEVRVTIMAEHELS CCCCCHHHHCCCCCCCCCCCHHHEEHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCH ATADTIPARHRLPVAQYAAHLLCHQLATHYSAQREAAMGSDASMTESRARQFADRARELR HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TAYFAGVGLPDPFKAGGTASAPGAAAAAVVSWPSRNPRYSLVRRGLL HHHHHCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA