Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612739
Identifier: 120612739
GI number: 120612739
Start: 4559599
End: 4560099
Strand: Reverse
Name: 120612739
Synonym: Aave_4102
Alternate gene names: NA
Gene position: 4560099-4559599 (Counterclockwise)
Preceding gene: 120612740
Following gene: 120612738
Centisome position: 85.19
GC content: 69.26
Gene sequence:
>501_bases GTGAACCTGTCGATCAACATGGGCTCGCTCCAGTCGTTCGTGCGGGGGCTGCGCGAGGCGCCCGAGTACACCGACCAAGT GCTCCTCTCTGCGATGACGGAGGCCACTCTGCTGCTGCAACGCGAGTGGCAGGAGCGCATGGCGCGCGTTTCGGGCATCA CGGCGGCCAGTATCACCAGCGACGTGGCGAGCACGCCCGCGGGCGTGCTGGGCATCGTGGGCAGCAGCCAGCCGTCTGCC CTGTTCGTGGAGTTGGGCACGCGCCCGCACATGCCGCCTGTGGCCGCCATCGAGCCCTGGGTGCGTGCGGTGCTGGGCAT CCGCGAGCCCAAGGACGTCAAGCGCGTGGCCTTCCTGGTGGCCCGGAAGATCGCCGAAAAGGGCACCCCCGCGCAGCGCC CTATGGCGCGCGCTGCGCAGGCCACCGAAGGGCAGATCGTGGCGATGTTTGAACGTGCGGCCGACCGGGTCGCGAAGTAT CTCGAAGGGACCGCCTCGTGA
Upstream 100 bases:
>100_bases AGGCTGGTGGCACGGCGAGCGCGCCCGGCGCTGCGGCCGCCGCGGTCGTGAGCTGGCCGTCGCGCAACCCGCGCTACAGC CTGGTGAGGAGAGGCCTGCT
Downstream 100 bases:
>100_bases GCATGCCGAACACCCTGGCCGAGTCGCGCTCTGCGTTGCAGGCCGTCCTGCAGGCCGTGCCTGCCGTTGGCGTGGTGCAC GCCTGCGAACGCTTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNLSINMGSLQSFVRGLREAPEYTDQVLLSAMTEATLLLQREWQERMARVSGITAASITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEKGTPAQRPMARAAQATEGQIVAMFERAADRVAKY LEGTAS
Sequences:
>Translated_166_residues MNLSINMGSLQSFVRGLREAPEYTDQVLLSAMTEATLLLQREWQERMARVSGITAASITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEKGTPAQRPMARAAQATEGQIVAMFERAADRVAKY LEGTAS >Mature_166_residues MNLSINMGSLQSFVRGLREAPEYTDQVLLSAMTEATLLLQREWQERMARVSGITAASITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEKGTPAQRPMARAAQATEGQIVAMFERAADRVAKY LEGTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17860; Mature: 17860
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSINMGSLQSFVRGLREAPEYTDQVLLSAMTEATLLLQREWQERMARVSGITAASITS CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DVASTPAGVLGIVGSSQPSALFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLV HHHCCCCHHEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ARKIAEKGTPAQRPMARAAQATEGQIVAMFERAADRVAKYLEGTAS HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLSINMGSLQSFVRGLREAPEYTDQVLLSAMTEATLLLQREWQERMARVSGITAASITS CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DVASTPAGVLGIVGSSQPSALFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLV HHHCCCCHHEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ARKIAEKGTPAQRPMARAAQATEGQIVAMFERAADRVAKYLEGTAS HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA