The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yiaM [C]

Identifier: 120612713

GI number: 120612713

Start: 4527867

End: 4528439

Strand: Direct

Name: yiaM [C]

Synonym: Aave_4076

Alternate gene names: 120612713

Gene position: 4527867-4528439 (Clockwise)

Preceding gene: 120612704

Following gene: 120612714

Centisome position: 84.59

GC content: 70.68

Gene sequence:

>573_bases
ATGCCTGCACCCCTGCCTCCCGGCGCAGAGGCCGACGCTTCCGCCACACCTCCCAGCCCCCCTCTGGGCGGGCAACCTTC
TTCGGATACCGCCACCGAACGCTCCCTGCGCCTCGAGGACTGGCTGACAGTGGCCATCATGGCCCTGCTGGCGCTCATCA
CGTTCGCCAACGTGCTCGTCCGTTACTTCACCAACTCCTCCTTCGCCTGGACCGAGGAGCTCTCCGTCTTTCTGATGATC
GTGCTGGCGCTGGTGGCGGGCTCGGCCGCGGTGGCGCGGGACGTGCACATCCGCATCGAGTATTTCGCCGAAGGCGGCTC
CGCGGCGCGCCGGCGGCGCCTCGCGCGTTTCGGGGCCCTCTCGGTCGCCATCCTGTTCGCCGGTATCGCCGTGCTCAGCG
CCCGGGTGACCTGGGACGACTGGCGCTTCGGCGAGACGTCGCCGGGCATCGGGGTGCCGCAGTGGTGGTACTCCATCTGG
CTGCCGCTGCTGTCGGCCCTGATCACGCTGCGCGCCATCGGCCTCTTCCGCCGGCAGGGCGCAGCGGCCGCCACAGGGGG
TGGCCGGCCATGA

Upstream 100 bases:

>100_bases
GCCGCGCCGCGTTGCGCCTACACTGCGCGCTGACCGTCCGGACCGGGGCGCGCGCCATGCCGCGCGCCTGGTTCCATTGC
CCTCGCTCCTGCCATCTCCC

Downstream 100 bases:

>100_bases
TCGCGGCGCTGCTCTTCGCCGCCTTCCTGGGCATGATGGCCGCCGGCGTGCCGATCGGCGCCGCGCTCGGACTGGCCGGC
AGCGCCGCCATCGCCATCGC

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter Subunit DctQ; TRAP Transporter Small Transmembrane Protein; Integral Membrane Protein; Tripartite ATP-Independent Periplasmic; DctQ1 Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPAPLPPGAEADASATPPSPPLGGQPSSDTATERSLRLEDWLTVAIMALLALITFANVLVRYFTNSSFAWTEELSVFLMI
VLALVAGSAAVARDVHIRIEYFAEGGSAARRRRLARFGALSVAILFAGIAVLSARVTWDDWRFGETSPGIGVPQWWYSIW
LPLLSALITLRAIGLFRRQGAAAATGGGRP

Sequences:

>Translated_190_residues
MPAPLPPGAEADASATPPSPPLGGQPSSDTATERSLRLEDWLTVAIMALLALITFANVLVRYFTNSSFAWTEELSVFLMI
VLALVAGSAAVARDVHIRIEYFAEGGSAARRRRLARFGALSVAILFAGIAVLSARVTWDDWRFGETSPGIGVPQWWYSIW
LPLLSALITLRAIGLFRRQGAAAATGGGRP
>Mature_189_residues
PAPLPPGAEADASATPPSPPLGGQPSSDTATERSLRLEDWLTVAIMALLALITFANVLVRYFTNSSFAWTEELSVFLMIV
LALVAGSAAVARDVHIRIEYFAEGGSAARRRRLARFGALSVAILFAGIAVLSARVTWDDWRFGETSPGIGVPQWWYSIWL
PLLSALITLRAIGLFRRQGAAAATGGGRP

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20336; Mature: 20204

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPLPPGAEADASATPPSPPLGGQPSSDTATERSLRLEDWLTVAIMALLALITFANVLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYFTNSSFAWTEELSVFLMIVLALVAGSAAVARDVHIRIEYFAEGGSAARRRRLARFGAL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHH
SVAILFAGIAVLSARVTWDDWRFGETSPGIGVPQWWYSIWLPLLSALITLRAIGLFRRQG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AAAATGGGRP
CCCCCCCCCC
>Mature Secondary Structure 
PAPLPPGAEADASATPPSPPLGGQPSSDTATERSLRLEDWLTVAIMALLALITFANVLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYFTNSSFAWTEELSVFLMIVLALVAGSAAVARDVHIRIEYFAEGGSAARRRRLARFGAL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHH
SVAILFAGIAVLSARVTWDDWRFGETSPGIGVPQWWYSIWLPLLSALITLRAIGLFRRQG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AAAATGGGRP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA