Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612704
Identifier: 120612704
GI number: 120612704
Start: 4519696
End: 4520601
Strand: Direct
Name: 120612704
Synonym: Aave_4067
Alternate gene names: NA
Gene position: 4519696-4520601 (Clockwise)
Preceding gene: 120612703
Following gene: 120612713
Centisome position: 84.44
GC content: 70.2
Gene sequence:
>906_bases ATGCCCCACTCCGACGCGCCTTCCCTTTCTCCAGCAGGCCTGCAGCCGCTGGCCCTCTGGCACGCGCCCGGTGACCTGAT CGGCGTCTTCACCGACATCGACGACACGCTGACCACCGACGGCGCCATCACCGCCGATGCACTGGACGCGCTACAGGCGC TGCGGCATGCCGGGCTCGCGGTGATCCCCGTCACAGGCCGTCCAGCGGGATGGAGCGAGCCGTTCGCGGCCTCCTGGCCG GTGAATGCGATCGTGGCGGAGAACGGCGCTGTCGCCATGGTGCGCGTGGCCGGAGCGGACGCGGGGGAAGCCCCCACCCC CTGCGGAGAAGGCGCCGTGGTGGTGCATCCCGCGGGGCCGGGCGGGCCGGCGCTGTGCAAGCTCTACCAGCAGGACGCCG CCACGCGCGCGGTGCAATATGCGCGCATGCAGCAGGTGCTTGCACGGATCGAACACGAGGTGCCGGGAGCACGGCGGGCC ACGGACTCCGCGGGACGGGAATGCGACATCGCCATCGACCACAGCGAATTCACGCACCTGCCCCAGGAAACCATCGATGC CGTCGTGCAGCGCATGCGCGCCGCAGGCATGCACGCCACGGTGAGCAGCATCCACATCAATGGCTGGTACGGCGACCACG ACAAGCTCGCCGGCGCGCGCTGGATCGTTCGTGAACTCTTCGGCCGCGTGCTGGACGACGAGATCGGCCGCTGGGTCTAC GTGGGCGACTCCACCAACGACCAGAAGATGTTCGAAGCCTTTCCGCACAGCGTGGGCGTGGCCAACATCGCCCGGTTCGT CTCGCAGCTGGTGCATCGGCCGCGCCACGTCACGCGCGCGGAGCGCGGTGCCGGCTTCGCCGAAGTGGCGCGCGCGATAC TGCAGGCCGGCAGGGCCACCGCCTGA
Upstream 100 bases:
>100_bases GCCGGCCCGGCAGGGCCGCGTCCCGCGAGGGCATGACGCTGTCGCCAGCGAACGGGGCCGTCATGTCTCTTCTCCGCTCC CGTACATCCCACCATCCCAG
Downstream 100 bases:
>100_bases GCTCCGCGGCCGGGCCCCGGCGGAGACCGCTTCGGATCACGCAGGCTTGGCCAGGCCCAGACGCTCGATGATGGCCTTTT CCCGCGAATAGGTATCCTGG
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; Hydrolase Protein; IIB Family HAD Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPHSDAPSLSPAGLQPLALWHAPGDLIGVFTDIDDTLTTDGAITADALDALQALRHAGLAVIPVTGRPAGWSEPFAASWP VNAIVAENGAVAMVRVAGADAGEAPTPCGEGAVVVHPAGPGGPALCKLYQQDAATRAVQYARMQQVLARIEHEVPGARRA TDSAGRECDIAIDHSEFTHLPQETIDAVVQRMRAAGMHATVSSIHINGWYGDHDKLAGARWIVRELFGRVLDDEIGRWVY VGDSTNDQKMFEAFPHSVGVANIARFVSQLVHRPRHVTRAERGAGFAEVARAILQAGRATA
Sequences:
>Translated_301_residues MPHSDAPSLSPAGLQPLALWHAPGDLIGVFTDIDDTLTTDGAITADALDALQALRHAGLAVIPVTGRPAGWSEPFAASWP VNAIVAENGAVAMVRVAGADAGEAPTPCGEGAVVVHPAGPGGPALCKLYQQDAATRAVQYARMQQVLARIEHEVPGARRA TDSAGRECDIAIDHSEFTHLPQETIDAVVQRMRAAGMHATVSSIHINGWYGDHDKLAGARWIVRELFGRVLDDEIGRWVY VGDSTNDQKMFEAFPHSVGVANIARFVSQLVHRPRHVTRAERGAGFAEVARAILQAGRATA >Mature_300_residues PHSDAPSLSPAGLQPLALWHAPGDLIGVFTDIDDTLTTDGAITADALDALQALRHAGLAVIPVTGRPAGWSEPFAASWPV NAIVAENGAVAMVRVAGADAGEAPTPCGEGAVVVHPAGPGGPALCKLYQQDAATRAVQYARMQQVLARIEHEVPGARRAT DSAGRECDIAIDHSEFTHLPQETIDAVVQRMRAAGMHATVSSIHINGWYGDHDKLAGARWIVRELFGRVLDDEIGRWVYV GDSTNDQKMFEAFPHSVGVANIARFVSQLVHRPRHVTRAERGAGFAEVARAILQAGRATA
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31939; Mature: 31808
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSDAPSLSPAGLQPLALWHAPGDLIGVFTDIDDTLTTDGAITADALDALQALRHAGLA CCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHCCEE VIPVTGRPAGWSEPFAASWPVNAIVAENGAVAMVRVAGADAGEAPTPCGEGAVVVHPAGP EEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCC GGPALCKLYQQDAATRAVQYARMQQVLARIEHEVPGARRATDSAGRECDIAIDHSEFTHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHCC PQETIDAVVQRMRAAGMHATVSSIHINGWYGDHDKLAGARWIVRELFGRVLDDEIGRWVY CHHHHHHHHHHHHHCCCCEEEEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEE VGDSTNDQKMFEAFPHSVGVANIARFVSQLVHRPRHVTRAERGAGFAEVARAILQAGRAT ECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCC A C >Mature Secondary Structure PHSDAPSLSPAGLQPLALWHAPGDLIGVFTDIDDTLTTDGAITADALDALQALRHAGLA CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHCCEE VIPVTGRPAGWSEPFAASWPVNAIVAENGAVAMVRVAGADAGEAPTPCGEGAVVVHPAGP EEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCC GGPALCKLYQQDAATRAVQYARMQQVLARIEHEVPGARRATDSAGRECDIAIDHSEFTHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHCC PQETIDAVVQRMRAAGMHATVSSIHINGWYGDHDKLAGARWIVRELFGRVLDDEIGRWVY CHHHHHHHHHHHHHCCCCEEEEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEE VGDSTNDQKMFEAFPHSVGVANIARFVSQLVHRPRHVTRAERGAGFAEVARAILQAGRAT ECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA