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The map label for this gene is ygiK [H]

Identifier: 120612714

GI number: 120612714

Start: 4528436

End: 4529734

Strand: Direct

Name: ygiK [H]

Synonym: Aave_4077

Alternate gene names: 120612714

Gene position: 4528436-4529734 (Clockwise)

Preceding gene: 120612713

Following gene: 120612715

Centisome position: 84.6

GC content: 69.75

Gene sequence:

>1299_bases
ATGATCGCGGCGCTGCTCTTCGCCGCCTTCCTGGGCATGATGGCCGCCGGCGTGCCGATCGGCGCCGCGCTCGGACTGGC
CGGCAGCGCCGCCATCGCCATCGCCAACGCCGACTCGCCCTGGTTCGGCCTGCTGGCAGTGCCGCAGAACTTCTATGCCG
GGCTCGGCAAATACCCCCTGCTCGCCATTCCCATGTTCGTGCTGGTCGGCTCGATATTCGACCGCTCCGGCGTGGCGCTC
CGCCTCGTGAACTTCGCGGTGGCCATCGTCGGCCGCGGCCCCGGCATGCTGCCACTCGTGGCCATCGCGGTGGCGATGTT
CCTGGGTGGCATCTCCGGCTCCGGGCCGGCCAACGCGGCGGCCGTGGGCGGCGTGATGATCGCCGCCATGTCGCGCGCGG
GCTACCCGGGCTCGTTCTCGGCCAGCGTCGTCGGCGCGGCGGCGGCCACCGACATCCTGATCCCGCCGTCGGTCGCCTTC
ATCATCTACTCGGTGCTGGTGCCCGGCGCCCCGGTGCCCGCCCTGTTCGCCGCCGGCATGGTGCCGGGCGTGCTCGCGGG
GATCGCACTCGTCGTGCCCGCGGTGTGGCTGGCGCGCCGCCACCGCATGGGCGCACTGGAGGCCACCATGCCCCGCCCCC
CTTTCTGGAAGAGCCTGCGCGAAGCTTCCTGGGGCCTGGCCGCGCCGGTGGTCATCCTCGGTGGCATGCGCGCGGGCTGG
TTCACGCCCACCGAGGCGGCTGTGGTCGCGGTGTTCTACGGCCTTTTCGTGGGCATGTGCATCCACCGCACCATCGGCCT
GCGCGACCTGTTCCCGATCCTGCGCGAGGCCGGCGAACTCTCGGGGGTGATCCTGCTGGTGGTTTCGCTGGCGGGCATCT
TCGCGTTCTCGCTGTCCACGCTCGGGGTGATCGACCCCATCGCCAACGCCATCGTGCATTCGGGCCTGGGCGAATACGGC
GTACTCGCGCTGCTGATCCTGCTGCTGATCACCGTGGGCATGTTCCTGGACGGCATCTCGATCTTCCTGATCTTCGTGCC
GCTGCTTCTGCCCATCATGCAGCACTACCAGTGGAACCCCGTATGGTTCGGGGTGATCCTCACCCTCAAGGTGGCGCTCG
GCCAGTTCACGCCGCCGCTGGCCGTGAACCTCATGGTGTCCTGCCGCATCGCGGGCGTGCGCATGGAGTCCACCGTGCGC
TGGGTGGGCCCCATGCTGCTGGCCATGTTCCTCGTGATGGTGGCCGTCATCGCCTTTCCGCAACTGGCCCTCTGGCTGCC
GGCGCGCCTGGGCTATTGA

Upstream 100 bases:

>100_bases
ACTCCATCTGGCTGCCGCTGCTGTCGGCCCTGATCACGCTGCGCGCCATCGGCCTCTTCCGCCGGCAGGGCGCAGCGGCC
GCCACAGGGGGTGGCCGGCC

Downstream 100 bases:

>100_bases
AGCCGCGCGCTTTTTCCCTTCCGAAACCGACGATCCACAGGAGACGACTCATGCAACTGCGCACCTTCCTTGCCACCGCC
GTGGCCGCCGCGGCCGCACT

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MIAALLFAAFLGMMAAGVPIGAALGLAGSAAIAIANADSPWFGLLAVPQNFYAGLGKYPLLAIPMFVLVGSIFDRSGVAL
RLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAAAVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAF
IIYSVLVPGAPVPALFAAGMVPGVLAGIALVVPAVWLARRHRMGALEATMPRPPFWKSLREASWGLAAPVVILGGMRAGW
FTPTEAAVVAVFYGLFVGMCIHRTIGLRDLFPILREAGELSGVILLVVSLAGIFAFSLSTLGVIDPIANAIVHSGLGEYG
VLALLILLLITVGMFLDGISIFLIFVPLLLPIMQHYQWNPVWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVR
WVGPMLLAMFLVMVAVIAFPQLALWLPARLGY

Sequences:

>Translated_432_residues
MIAALLFAAFLGMMAAGVPIGAALGLAGSAAIAIANADSPWFGLLAVPQNFYAGLGKYPLLAIPMFVLVGSIFDRSGVAL
RLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAAAVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAF
IIYSVLVPGAPVPALFAAGMVPGVLAGIALVVPAVWLARRHRMGALEATMPRPPFWKSLREASWGLAAPVVILGGMRAGW
FTPTEAAVVAVFYGLFVGMCIHRTIGLRDLFPILREAGELSGVILLVVSLAGIFAFSLSTLGVIDPIANAIVHSGLGEYG
VLALLILLLITVGMFLDGISIFLIFVPLLLPIMQHYQWNPVWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVR
WVGPMLLAMFLVMVAVIAFPQLALWLPARLGY
>Mature_432_residues
MIAALLFAAFLGMMAAGVPIGAALGLAGSAAIAIANADSPWFGLLAVPQNFYAGLGKYPLLAIPMFVLVGSIFDRSGVAL
RLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAAAVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAF
IIYSVLVPGAPVPALFAAGMVPGVLAGIALVVPAVWLARRHRMGALEATMPRPPFWKSLREASWGLAAPVVILGGMRAGW
FTPTEAAVVAVFYGLFVGMCIHRTIGLRDLFPILREAGELSGVILLVVSLAGIFAFSLSTLGVIDPIANAIVHSGLGEYG
VLALLILLLITVGMFLDGISIFLIFVPLLLPIMQHYQWNPVWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVR
WVGPMLLAMFLVMVAVIAFPQLALWLPARLGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=406, Percent_Identity=33.0049261083744, Blast_Score=161, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44852; Mature: 44852

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALLFAAFLGMMAAGVPIGAALGLAGSAAIAIANADSPWFGLLAVPQNFYAGLGKYPL
CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHCCCCCHH
LAIPMFVLVGSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
AVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAFIIYSVLVPGAPVPALFAAGM
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VPGVLAGIALVVPAVWLARRHRMGALEATMPRPPFWKSLREASWGLAAPVVILGGMRAGW
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCC
FTPTEAAVVAVFYGLFVGMCIHRTIGLRDLFPILREAGELSGVILLVVSLAGIFAFSLST
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVIDPIANAIVHSGLGEYGVLALLILLLITVGMFLDGISIFLIFVPLLLPIMQHYQWNP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVRWVGPMLLAMFLVMVAVIAFP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECEEHHHHHHHHHHHHHHHHHHHHHHHHHH
QLALWLPARLGY
HHHHHHHHHCCC
>Mature Secondary Structure
MIAALLFAAFLGMMAAGVPIGAALGLAGSAAIAIANADSPWFGLLAVPQNFYAGLGKYPL
CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHCCCCCHH
LAIPMFVLVGSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
AVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAFIIYSVLVPGAPVPALFAAGM
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VPGVLAGIALVVPAVWLARRHRMGALEATMPRPPFWKSLREASWGLAAPVVILGGMRAGW
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCC
FTPTEAAVVAVFYGLFVGMCIHRTIGLRDLFPILREAGELSGVILLVVSLAGIFAFSLST
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVIDPIANAIVHSGLGEYGVLALLILLLITVGMFLDGISIFLIFVPLLLPIMQHYQWNP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVRWVGPMLLAMFLVMVAVIAFP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECEEHHHHHHHHHHHHHHHHHHHHHHHHHH
QLALWLPARLGY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]