Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is gltJ [H]
Identifier: 120612709
GI number: 120612709
Start: 4523791
End: 4524522
Strand: Reverse
Name: gltJ [H]
Synonym: Aave_4072
Alternate gene names: 120612709
Gene position: 4524522-4523791 (Counterclockwise)
Preceding gene: 120612710
Following gene: 120612708
Centisome position: 84.53
GC content: 64.62
Gene sequence:
>732_bases ATGGGATCGAATTGGGATTGGCAGGTCTTCCTGCAGGACCCGGGGGGCGATTATCCGACCTACCTCCAGTGGATGCTATC GGCCTGGGGCTGGACCGTGTCGGTGGCCCTGCTGGCGCTGGTGATCGCGCTGGTGGCGGGCTCGGTCATCGGCACGCTGC GCACGCTGCCGGACAACAGGTTTCTGGTCGGCTTCGGCAACGCGTGGGTGGAACTGTTCCGCAACATCCCCCTGCTGGTG CAGATTTTCCTGTGGTACCACGTGGTGCCTGCCATCTTCCCCGTGATGAAGAGCGTTTCCGGCTTCATCCTGGTGGTGCT GGCGCTGGGGTTCTTCACGTCGGCGCGGATCGCCGAACAGGTGCGCTCGGGCATCCAGGCCCTGCCGCGCGGCCAGCGCT ATGCCGGCATGGCGCTGGGCTTCACCACCGTGCAGTACTACCGCTACGTGCTGCTGCCCATGGCATTCCGCATCATCCTG CCGCCGCTGACCAGCGAGACGATGAACATCTTCAAGAACTCGTCGGTGGCCTTCGCCGTGTCGGTGACCGAACTGACCAT GTTCGCCATGCAGGCGCAGGAAGAAACCTCGCGCGGCATCGAAATCTATCTGGCGGTGACGGGCCTGTACGTCGTCTCGG CCTTCGCCATCAACCGCATCATGGCCTTCATCGAAAAGCGCGCGCGCGTCCCGGGCTTCATCGTCGCGGGCGGCACGGGG GGAGGCCACTGA
Upstream 100 bases:
>100_bases GAACGCCCACCTCGCCGGTGGGCGTTTGCTTGTTGTCCCGCTGCGGCGGGCGGACGGCCGTCGGTTTTCAGGACGTATGA CGATTTGAGAAGGAATTCCC
Downstream 100 bases:
>100_bases CATGATGAATCTCGACTTTTCCTTCTACAGCTGGGACATCATCAGCAAGTTCGTCGTCAAGGGCTTCTATTTCAGCTTCA TGCTGACGCTGATCGCCACG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGSNWDWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELFRNIPLLV QIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIIL PPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARVPGFIVAGGTG GGH
Sequences:
>Translated_243_residues MGSNWDWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELFRNIPLLV QIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIIL PPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARVPGFIVAGGTG GGH >Mature_242_residues GSNWDWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELFRNIPLLVQ IFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILP PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARVPGFIVAGGTGG GH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=242, Percent_Identity=41.7355371900826, Blast_Score=197, Evalue=4e-52, Organism=Escherichia coli, GI48994930, Length=124, Percent_Identity=38.7096774193548, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=26.5402843601896, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=29.064039408867, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=28.436018957346, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI87082239, Length=161, Percent_Identity=27.3291925465839, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=25.7281553398058, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787086, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26843; Mature: 26712
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNWDWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNR CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FLVGFGNAWVELFRNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQ EEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILPPLTSETMNIFKNSSVAFAV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE SVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARVPGFIVAGGTG HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC GGH CCC >Mature Secondary Structure GSNWDWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNR CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FLVGFGNAWVELFRNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSARIAEQ EEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILPPLTSETMNIFKNSSVAFAV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE SVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARVPGFIVAGGTG HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC GGH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]