Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is gltK [H]
Identifier: 120612708
GI number: 120612708
Start: 4523097
End: 4523789
Strand: Reverse
Name: gltK [H]
Synonym: Aave_4071
Alternate gene names: 120612708
Gene position: 4523789-4523097 (Counterclockwise)
Preceding gene: 120612709
Following gene: 120612707
Centisome position: 84.51
GC content: 61.47
Gene sequence:
>693_bases ATGATGAATCTCGACTTTTCCTTCTACAGCTGGGACATCATCAGCAAGTTCGTCGTCAAGGGCTTCTATTTCAGCTTCAT GCTGACGCTGATCGCCACGATCGGCGGCATCCTGCTGGGCACCGTGCTGGCACTGATGCGCCTTTCGGGCAGGAAGTGGC TGGACGTGCCGGCCACCATCTACGTCAACGGCATGCGCAGCATCCCGCTGGTGATGGTGATCCTGTGGTTCTTCCTGCTG GTGCCGGCTTCGTTCTATGCGGCCCTGCCCGGCGGGATCGGCTCGAGCTACCGCTCGGAGTTGTCGGCCATCATCACCTT CATCGCCTTCGAGGCGGCCTACTTCAGCGAGATCATGCGGGCCGGCATCCAGTCCATCCCGCGCGGCCAGGTGTTCGCAG GCCAGGCGCTGGGTATGACCTACGGCCAGAACATGAAGATCGTGATCCTGCCGCAGGCGTTCCGCAATATGCTGCCGGTG CTGCTGACACAGACCATCATCCTGTTCCAGGACACGTCGCTCGTGTATGCCATCGGCGCCTACGACATGCTCAAGGGCTT CGAGACCGCCGGCAAGAACTATGGCCGCCCGATCGAGGCCTACCTGCTGGCCGCGGTCGTGTACTTCATGATGTGCTTCG CGCTCTCCTGGGCGGTGAAGCGCCTGCACCGCAAGATCGCCATCATCCGCTGA
Upstream 100 bases:
>100_bases GTCTCGGCCTTCGCCATCAACCGCATCATGGCCTTCATCGAAAAGCGCGCGCGCGTCCCGGGCTTCATCGTCGCGGGCGG CACGGGGGGAGGCCACTGAC
Downstream 100 bases:
>100_bases CCCGTGCGGCAAGTGAGTGAGGAATAAAGCAAATGATTGAACTCAAGAACGTTTCCAAGTGGTATGGCAGCTTCCAGGTG CTGAACGACTGCTCCACCAG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVLALMRLSGRKWLDVPATIYVNGMRSIPLVMVILWFFLL VPASFYAALPGGIGSSYRSELSAIITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPV LLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR
Sequences:
>Translated_230_residues MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVLALMRLSGRKWLDVPATIYVNGMRSIPLVMVILWFFLL VPASFYAALPGGIGSSYRSELSAIITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPV LLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR >Mature_230_residues MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVLALMRLSGRKWLDVPATIYVNGMRSIPLVMVILWFFLL VPASFYAALPGGIGSSYRSELSAIITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPV LLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=48.1308411214953, Blast_Score=178, Evalue=2e-46, Organism=Escherichia coli, GI87082239, Length=199, Percent_Identity=31.1557788944724, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787030, Length=231, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786874, Length=175, Percent_Identity=30.8571428571429, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788226, Length=203, Percent_Identity=34.4827586206897, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI48994930, Length=156, Percent_Identity=31.4102564102564, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=25.9803921568627, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787087, Length=125, Percent_Identity=28.8, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=24.0740740740741, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25762; Mature: 25762
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVLALMRLSGRKWLDVPATI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE YVNGMRSIPLVMVILWFFLLVPASFYAALPGGIGSSYRSELSAIITFIAFEAAYFSEIMR EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGA HHHHHCCCCCEECCHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHEECCHHHEEHHH YDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVLALMRLSGRKWLDVPATI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE YVNGMRSIPLVMVILWFFLLVPASFYAALPGGIGSSYRSELSAIITFIAFEAAYFSEIMR EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGA HHHHHCCCCCEECCHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHEECCHHHEEHHH YDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]