Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is gltI [H]
Identifier: 120612710
GI number: 120612710
Start: 4524648
End: 4525550
Strand: Reverse
Name: gltI [H]
Synonym: Aave_4073
Alternate gene names: 120612710
Gene position: 4525550-4524648 (Counterclockwise)
Preceding gene: 120612711
Following gene: 120612709
Centisome position: 84.55
GC content: 61.9
Gene sequence:
>903_bases ATGAAGAAACAATTGTTGGCAGTTGCAGTGATGGCGCTCGCTGCGGGCAGCGCATTCGCCCAGGCGAACGACACGCTGGC CAAGATCAAGGCCTCCGGCACCATCACCGAAGGCGTGCGCGAGTCTTCCGGTCTCTCCTACACCCTGGGCGACGGCAAGT ACACCGGCTTCCATTACGACGTGTGCGCGCGCGTGATCTCCGACGTCCAGAAGCAGCTCGGCCTGTCCAAGCTGGAAACC AGGTACCAGCCCGTGACCTCGCAGAACCGCATTCCGCTGGTGCAGAACGGTACGGTGGACATCGAGTGCGGCTCGACCAC CAACAACCAGGCGCGCCAGAAGGACGTGGCCTTCGCCGTGACCACCTACGTGGAAGAAGTGCGCATCGCCGTCAAGGCCA ACTCGGGCATTTCCGGCATCAAGGACCTGAACGGCAAGACCATCGCCACCACGACGGGCACCACCTCGGTGCAGACCCTG CGCAAGAACAAGCGCGCGGAGGGCCTGACGTTCAAGGAAGTGTTCGGCAAGGACCACTCCGACAGCTTCCTGCTGCTGGA GTCCGGCCGTGCGGACGCCTTCATCATGGACGGCTCGATCCTGGCCTCCAACATCGCCAAATCCAAGGCGCCCAACGACT TCAAGATCGTCGGCGAAACGTTGAGCGTGGAACCCATCGCGATCATGATCCGCAAGGACGACCCGGCCTTCAAGAAGGCC GTGGACGACAGCCTGAAGGGCATGATGAAGTCGGGCGAGATGGCCAAGCTCTACGACAAGTGGTTCATGCAGCCCATCCC GCCGAACAACGTGAAGATCGGCCTGCCGGCGAGCGAAGCCACCAAGGCCGCTTGGGCGAACCCCAACGACAAGCCCATGG AGGAATACACGCTCAAGGATTGA
Upstream 100 bases:
>100_bases GCGTTTACCCCATTCGGGATATTCCCTGCAACGGCAGATGCCTTGCGCGCGTCTATCTAGAATGCCTCTTCCCTTGTATC CATAAGCTAAGGAGATCGTG
Downstream 100 bases:
>100_bases TGCGTACGGACCTGTCCGCCCCTGCGAACGCCCACCTCGCCGGTGGGCGTTTGCTTGTTGTCCCGCTGCGGCGGGCGGAC GGCCGTCGGTTTTCAGGACG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKQLLAVAVMALAAGSAFAQANDTLAKIKASGTITEGVRESSGLSYTLGDGKYTGFHYDVCARVISDVQKQLGLSKLET RYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAVTTYVEEVRIAVKANSGISGIKDLNGKTIATTTGTTSVQTL RKNKRAEGLTFKEVFGKDHSDSFLLLESGRADAFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKA VDDSLKGMMKSGEMAKLYDKWFMQPIPPNNVKIGLPASEATKAAWANPNDKPMEEYTLKD
Sequences:
>Translated_300_residues MKKQLLAVAVMALAAGSAFAQANDTLAKIKASGTITEGVRESSGLSYTLGDGKYTGFHYDVCARVISDVQKQLGLSKLET RYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAVTTYVEEVRIAVKANSGISGIKDLNGKTIATTTGTTSVQTL RKNKRAEGLTFKEVFGKDHSDSFLLLESGRADAFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKA VDDSLKGMMKSGEMAKLYDKWFMQPIPPNNVKIGLPASEATKAAWANPNDKPMEEYTLKD >Mature_300_residues MKKQLLAVAVMALAAGSAFAQANDTLAKIKASGTITEGVRESSGLSYTLGDGKYTGFHYDVCARVISDVQKQLGLSKLET RYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAVTTYVEEVRIAVKANSGISGIKDLNGKTIATTTGTTSVQTL RKNKRAEGLTFKEVFGKDHSDSFLLLESGRADAFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKA VDDSLKGMMKSGEMAKLYDKWFMQPIPPNNVKIGLPASEATKAAWANPNDKPMEEYTLKD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=44.0740740740741, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI1787031, Length=220, Percent_Identity=27.7272727272727, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788228, Length=266, Percent_Identity=26.6917293233083, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32423; Mature: 32423
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLLAVAVMALAAGSAFAQANDTLAKIKASGTITEGVRESSGLSYTLGDGKYTGFHYD CCHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCEECCCHHH VCARVISDVQKQLGLSKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAV HHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHH TTYVEEVRIAVKANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHS HHHHHHEEEEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHCCCCC DSFLLLESGRADAFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKA CCEEEEECCCCCEEEECCHHHHHHHHHHCCCCCEEEECCEECCCEEEEEEECCCHHHHHH VDDSLKGMMKSGEMAKLYDKWFMQPIPPNNVKIGLPASEATKAAWANPNDKPMEEYTLKD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKQLLAVAVMALAAGSAFAQANDTLAKIKASGTITEGVRESSGLSYTLGDGKYTGFHYD CCHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCEECCCHHH VCARVISDVQKQLGLSKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVAFAV HHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHH TTYVEEVRIAVKANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHS HHHHHHEEEEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHCCCCC DSFLLLESGRADAFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKA CCEEEEECCCCCEEEECCHHHHHHHHHHCCCCCEEEECCEECCCEEEEEEECCCHHHHHH VDDSLKGMMKSGEMAKLYDKWFMQPIPPNNVKIGLPASEATKAAWANPNDKPMEEYTLKD HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]