Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612624
Identifier: 120612624
GI number: 120612624
Start: 4419932
End: 4420909
Strand: Direct
Name: 120612624
Synonym: Aave_3986
Alternate gene names: NA
Gene position: 4419932-4420909 (Clockwise)
Preceding gene: 120612623
Following gene: 120612626
Centisome position: 82.57
GC content: 71.68
Gene sequence:
>978_bases ATGCCCATCCATCGCCGCCACCTGCTCGCCACGGCCGCCGCTGGGCTGGCGCTGCCCTGGCACCTCACCGCCCGCGCGCA GCCCTGGCCCGCCCGGCCGATCCGCCTCGTGTCGCCTTACGGCGCCGGGGGTTCAAACGACATCCTCACGCGGGTGCTCG GCGACTTTCTGTCCCGCCGCCTGGGCCAGAGCATCGTGGTCGAGAACAAGGCCGGCGCCGGCACGCGCATCGCCAACGAA TCGGTGGCCAAGGCTGCCCCCGATGGCTACACGCTGCTGCATGCCGCGGCGCCGATCGCGATCGGAGAGGCGCTCTACAA GGAACTGCCCTACGACGTGCACAAGAGCTTCGCGGCCATCGGCAGCACGGCCATCGCGCCGCTGTTCCTGGTGGTGAACG CCCAGGCCCCCTACAAGACGCTGGCCGAATTCATCCGGCACGCGAAGGCGGACCCGAAGGGCGCGACCTTCGGATCGCCC GGCGCCGGTTCGGCGCCGCACCTCACGGCCGAGCTGCTGCTGCGCGCCGCGGATGCCAAGGGCGTCGTCGCGCAGTACCG CGGCGATGCACCGGCCTACACCGAGCTGCTGGCCGGGCGGATCGATGCCACGCTGACGGCGATCTCCACGGCCGTGCCGC ACATCCAGGCCGGCAAGCTGCGCGTCCTGGGCGTGGCGAATGAAGAGCGCACGCCGCTCTACCCCGACGCCCCGACCCTG CGCGAACAAGGCCTCCCCAGCGTGGTCGGCTACGGCTGGTACGGCATGCTCGCGCCGGCCGGCACGCCGGCCGAGATCGT GGCACGCCTCCATGCGGAACTCCAGGCCGCCCTGGCCGACCCGGAGGTGCGACGCAAGGCGGAAGCCGCCGGCCTGCAAC TGCGCGGCGGCACGCCTGCCGAATTCAGCACATTCGTCGCGAGCGAGACGCGCAAGTGGGCACAGATCATCCAGGCCGCG CAGATCACGGCGGAATGA
Upstream 100 bases:
>100_bases GGCTGTACCAGCCCCGTGCCGAGCACCTGGAACGGCGCTTCGATTACCCGCCGATCCGCCCGATCTGACGCATGATTTCA ACAAGACGGAGACAAGCGCC
Downstream 100 bases:
>100_bases TGGCCACGCCCGGCCGCTGGCGACCGGAAGCGCCGCAGGGCGGCTGCGCCCCCGTACAGGCAAAAAAAAACCCGCCGAAG CGGGTCAACAGCAGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPIHRRHLLATAAAGLALPWHLTARAQPWPARPIRLVSPYGAGGSNDILTRVLGDFLSRRLGQSIVVENKAGAGTRIANE SVAKAAPDGYTLLHAAAPIAIGEALYKELPYDVHKSFAAIGSTAIAPLFLVVNAQAPYKTLAEFIRHAKADPKGATFGSP GAGSAPHLTAELLLRAADAKGVVAQYRGDAPAYTELLAGRIDATLTAISTAVPHIQAGKLRVLGVANEERTPLYPDAPTL REQGLPSVVGYGWYGMLAPAGTPAEIVARLHAELQAALADPEVRRKAEAAGLQLRGGTPAEFSTFVASETRKWAQIIQAA QITAE
Sequences:
>Translated_325_residues MPIHRRHLLATAAAGLALPWHLTARAQPWPARPIRLVSPYGAGGSNDILTRVLGDFLSRRLGQSIVVENKAGAGTRIANE SVAKAAPDGYTLLHAAAPIAIGEALYKELPYDVHKSFAAIGSTAIAPLFLVVNAQAPYKTLAEFIRHAKADPKGATFGSP GAGSAPHLTAELLLRAADAKGVVAQYRGDAPAYTELLAGRIDATLTAISTAVPHIQAGKLRVLGVANEERTPLYPDAPTL REQGLPSVVGYGWYGMLAPAGTPAEIVARLHAELQAALADPEVRRKAEAAGLQLRGGTPAEFSTFVASETRKWAQIIQAA QITAE >Mature_324_residues PIHRRHLLATAAAGLALPWHLTARAQPWPARPIRLVSPYGAGGSNDILTRVLGDFLSRRLGQSIVVENKAGAGTRIANES VAKAAPDGYTLLHAAAPIAIGEALYKELPYDVHKSFAAIGSTAIAPLFLVVNAQAPYKTLAEFIRHAKADPKGATFGSPG AGSAPHLTAELLLRAADAKGVVAQYRGDAPAYTELLAGRIDATLTAISTAVPHIQAGKLRVLGVANEERTPLYPDAPTLR EQGLPSVVGYGWYGMLAPAGTPAEIVARLHAELQAALADPEVRRKAEAAGLQLRGGTPAEFSTFVASETRKWAQIIQAAQ ITAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34166; Mature: 34035
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHRRHLLATAAAGLALPWHLTARAQPWPARPIRLVSPYGAGGSNDILTRVLGDFLSRR CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH LGQSIVVENKAGAGTRIANESVAKAAPDGYTLLHAAAPIAIGEALYKELPYDVHKSFAAI CCCEEEEECCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH GSTAIAPLFLVVNAQAPYKTLAEFIRHAKADPKGATFGSPGAGSAPHLTAELLLRAADAK HHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC GVVAQYRGDAPAYTELLAGRIDATLTAISTAVPHIQAGKLRVLGVANEERTPLYPDAPTL CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCH REQGLPSVVGYGWYGMLAPAGTPAEIVARLHAELQAALADPEVRRKAEAAGLQLRGGTPA HHCCCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCH EFSTFVASETRKWAQIIQAAQITAE HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIHRRHLLATAAAGLALPWHLTARAQPWPARPIRLVSPYGAGGSNDILTRVLGDFLSRR CCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH LGQSIVVENKAGAGTRIANESVAKAAPDGYTLLHAAAPIAIGEALYKELPYDVHKSFAAI CCCEEEEECCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH GSTAIAPLFLVVNAQAPYKTLAEFIRHAKADPKGATFGSPGAGSAPHLTAELLLRAADAK HHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC GVVAQYRGDAPAYTELLAGRIDATLTAISTAVPHIQAGKLRVLGVANEERTPLYPDAPTL CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCH REQGLPSVVGYGWYGMLAPAGTPAEIVARLHAELQAALADPEVRRKAEAAGLQLRGGTPA HHCCCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCH EFSTFVASETRKWAQIIQAAQITAE HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]