Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612615
Identifier: 120612615
GI number: 120612615
Start: 4406796
End: 4407245
Strand: Direct
Name: 120612615
Synonym: Aave_3976
Alternate gene names: NA
Gene position: 4406796-4407245 (Clockwise)
Preceding gene: 120612614
Following gene: 120612619
Centisome position: 82.33
GC content: 73.78
Gene sequence:
>450_bases ATGATGCGACTCCGAACCCGACTGCACCATCCCCTGGCCGCCCTGGCGCTGGGCGTCGCGGCGACCCTCGCCGCCGCGCC GTCCTCCGCCGCGGACGCGCCATCGAAAGCCACGGCCCGGGCCCCGCACGCCTCCGCAGCGGCCGAACCGGCCCGGCCCG GGGCCAGCCAGCCGCTCAGCAAGGGCGAGATCAAGGCGATCCGCGAGTTCCACATGCTGGATTTCAACGGCGACGGCAAG CTCAGCCGCAAGGAGGTGGCGATCATTCCCCGCCTGTCGGCGGCCTTCGACGATGCCGACACCAACCACGACGGCTACGT GACGCTGGACGAAGTGCGCACCTTTGCGGTGAAGTACCGCGCGGAGCGCGACCGGGCCAAAGCCGCGGCGGCTGCCGCAT CCGCCGCCCCCGCGGCTCCGGCGGCGTCCGCGCCCGCGGCCCGGAAGTAG
Upstream 100 bases:
>100_bases ACGTGGCCTCCGCGGCGCGGCACGTGCCGGCCGGGCACGTGAGCGCCGGCATCACCAACCTCGTGCGCGAGGAACCTCGG GCGGATGCCGTGCTCCCACC
Downstream 100 bases:
>100_bases GCCCCGGGCGGCACGGCGGCCCCGGTATCAGGAGCTGCCCGTGCGCTTGACCTTGGGATCGGCGTAGGTCAGCGGCTGGT CCTTGGCTTCCCGGGACATG
Product: signal transduction protein
Products: NA
Alternate protein names: Signal Transduction Protein With Efhand Domain; Signal Transduction Protein With
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MMRLRTRLHHPLAALALGVAATLAAAPSSAADAPSKATARAPHASAAAEPARPGASQPLSKGEIKAIREFHMLDFNGDGK LSRKEVAIIPRLSAAFDDADTNHDGYVTLDEVRTFAVKYRAERDRAKAAAAAASAAPAAPAASAPAARK
Sequences:
>Translated_149_residues MMRLRTRLHHPLAALALGVAATLAAAPSSAADAPSKATARAPHASAAAEPARPGASQPLSKGEIKAIREFHMLDFNGDGK LSRKEVAIIPRLSAAFDDADTNHDGYVTLDEVRTFAVKYRAERDRAKAAAAAASAAPAAPAASAPAARK >Mature_149_residues MMRLRTRLHHPLAALALGVAATLAAAPSSAADAPSKATARAPHASAAAEPARPGASQPLSKGEIKAIREFHMLDFNGDGK LSRKEVAIIPRLSAAFDDADTNHDGYVTLDEVRTFAVKYRAERDRAKAAAAAASAAPAAPAASAPAARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15372; Mature: 15372
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLRTRLHHPLAALALGVAATLAAAPSSAADAPSKATARAPHASAAAEPARPGASQPLS CCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGEIKAIREFHMLDFNGDGKLSRKEVAIIPRLSAAFDDADTNHDGYVTLDEVRTFAVKYR CHHHHHHHHHHHEEECCCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEHHHHHHHHHHHH AERDRAKAAAAAASAAPAAPAASAPAARK HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MMRLRTRLHHPLAALALGVAATLAAAPSSAADAPSKATARAPHASAAAEPARPGASQPLS CCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGEIKAIREFHMLDFNGDGKLSRKEVAIIPRLSAAFDDADTNHDGYVTLDEVRTFAVKYR CHHHHHHHHHHHEEECCCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEHHHHHHHHHHHH AERDRAKAAAAAASAAPAAPAASAPAARK HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA