Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612614
Identifier: 120612614
GI number: 120612614
Start: 4405858
End: 4406799
Strand: Direct
Name: 120612614
Synonym: Aave_3975
Alternate gene names: NA
Gene position: 4405858-4406799 (Clockwise)
Preceding gene: 120612613
Following gene: 120612615
Centisome position: 82.31
GC content: 71.76
Gene sequence:
>942_bases ATGGCCCTGACCCTGGACGACAAGCTCGTCGTCGCCATCTCCTCCCGGGCGCTCTTCGATTTCGAGGAAGAGAACCGCCT GTTCGAGGCCGGCGACGAGGCCGCCTACATGCGCCGCCAGCTGGAGCTGGTACAGCAGCCCGCGCGCGCGGGCATCGCCT TCCCGCTGGTGCGCAAGCTGCTCGGCTTCAACACCGCCCAGGCGCAGCGCGTGGAGGTGGTGGTGCTGTCGCGCAACGAC CCGGCCAGCGGCATGCGCGTGTTCGCCTCGGCGCACGCGGCGGGCATGCGCATCGAGCGTGGGGTGTTCACGCGCGGGCG CGATCCGTTCGCCTACCTGCGGCCGCTGGGCGCGCACCTGTTCCTCTCGGCCAACGAGAAGGACGTGCAGCAGGCGCTGA ACATGGGGTTCCCCGCGGCGCGCGTGATGACCGACTCCACCCCGGCGGGCGACCGCTACCCGCACGAGGTGCGCATCGCC TTCGACGGCGACGCGGTGCTGTTCTCCGACGAGGCCGAGCGCATCTACCAGCAGGGCGGCCTGCCCGCCTTCCACGAGCA CGAGGTGAGCAAGGCGGCGCTGCCGCTGGCCGGCGGCCCCTTCAAGCCGCTGCTGGCCGCGCTGCACCAGTTGCAGCAGC AGGCCGATGCGTCCGAGACCATGCGCATCCGCACCGCGCTGGTGACGGCGCGCAGCGCCCCGGCCCACGAGCGCGCCGTG CGCACGCTGCTGGACTGGGGCATCACCGTGGACGAGGCGATGTTCCTCGGCGGGCTGGAGAAAGGCCCGTTCCTGCGGGA ATTCGAGCCGGACTTCTTCTTCGACGACCAGCGCAGCCACGTGGCCTCCGCGGCGCGGCACGTGCCGGCCGGGCACGTGA GCGCCGGCATCACCAACCTCGTGCGCGAGGAACCTCGGGCGGATGCCGTGCTCCCACCATGA
Upstream 100 bases:
>100_bases CCCCTGCTCATCGTGGCGATGGGCGTGATCGTGATGCTCATCGTGCTGGCGGTGCTCATGCCCATCATCCAGCTCAACCA GTTCGTGAAGTAGCCCCGCC
Downstream 100 bases:
>100_bases TGCGACTCCGAACCCGACTGCACCATCCCCTGGCCGCCCTGGCGCTGGGCGTCGCGGCGACCCTCGCCGCCGCGCCGTCC TCCGCCGCGGACGCGCCATC
Product: 5-nucleotidase
Products: NA
Alternate protein names: 5-Nucleotidase 1A; 5-Nucleotidase Superfamily; 5 Nucleotidase; Uroporphyrin-III C-Methyltransferase-Like; 5-Nucleotidase Family Protein; 5-Nucleotidase Protein; 5-Nucleotidase Superfamily Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MALTLDDKLVVAISSRALFDFEEENRLFEAGDEAAYMRRQLELVQQPARAGIAFPLVRKLLGFNTAQAQRVEVVVLSRND PASGMRVFASAHAAGMRIERGVFTRGRDPFAYLRPLGAHLFLSANEKDVQQALNMGFPAARVMTDSTPAGDRYPHEVRIA FDGDAVLFSDEAERIYQQGGLPAFHEHEVSKAALPLAGGPFKPLLAALHQLQQQADASETMRIRTALVTARSAPAHERAV RTLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQRSHVASAARHVPAGHVSAGITNLVREEPRADAVLPP
Sequences:
>Translated_313_residues MALTLDDKLVVAISSRALFDFEEENRLFEAGDEAAYMRRQLELVQQPARAGIAFPLVRKLLGFNTAQAQRVEVVVLSRND PASGMRVFASAHAAGMRIERGVFTRGRDPFAYLRPLGAHLFLSANEKDVQQALNMGFPAARVMTDSTPAGDRYPHEVRIA FDGDAVLFSDEAERIYQQGGLPAFHEHEVSKAALPLAGGPFKPLLAALHQLQQQADASETMRIRTALVTARSAPAHERAV RTLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQRSHVASAARHVPAGHVSAGITNLVREEPRADAVLPP >Mature_312_residues ALTLDDKLVVAISSRALFDFEEENRLFEAGDEAAYMRRQLELVQQPARAGIAFPLVRKLLGFNTAQAQRVEVVVLSRNDP ASGMRVFASAHAAGMRIERGVFTRGRDPFAYLRPLGAHLFLSANEKDVQQALNMGFPAARVMTDSTPAGDRYPHEVRIAF DGDAVLFSDEAERIYQQGGLPAFHEHEVSKAALPLAGGPFKPLLAALHQLQQQADASETMRIRTALVTARSAPAHERAVR TLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQRSHVASAARHVPAGHVSAGITNLVREEPRADAVLPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14210538, Length=305, Percent_Identity=40.327868852459, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI50593110, Length=291, Percent_Identity=34.3642611683849, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI50593108, Length=291, Percent_Identity=34.3642611683849, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34391; Mature: 34260
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTLDDKLVVAISSRALFDFEEENRLFEAGDEAAYMRRQLELVQQPARAGIAFPLVRKL CEEECCCCEEEEEECCCEECCHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGFNTAQAQRVEVVVLSRNDPASGMRVFASAHAAGMRIERGVFTRGRDPFAYLRPLGAHL HCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHCCCEE FLSANEKDVQQALNMGFPAARVMTDSTPAGDRYPHEVRIAFDGDAVLFSDEAERIYQQGG EEECCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHCC LPAFHEHEVSKAALPLAGGPFKPLLAALHQLQQQADASETMRIRTALVTARSAPAHERAV CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHH RTLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQRSHVASAARHVPAGHVSAGITNL HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH VREEPRADAVLPP HHCCCCCCCCCCC >Mature Secondary Structure ALTLDDKLVVAISSRALFDFEEENRLFEAGDEAAYMRRQLELVQQPARAGIAFPLVRKL EEECCCCEEEEEECCCEECCHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGFNTAQAQRVEVVVLSRNDPASGMRVFASAHAAGMRIERGVFTRGRDPFAYLRPLGAHL HCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHCCCEE FLSANEKDVQQALNMGFPAARVMTDSTPAGDRYPHEVRIAFDGDAVLFSDEAERIYQQGG EEECCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHCC LPAFHEHEVSKAALPLAGGPFKPLLAALHQLQQQADASETMRIRTALVTARSAPAHERAV CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHH RTLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQRSHVASAARHVPAGHVSAGITNL HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH VREEPRADAVLPP HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA