Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cphA [H]
Identifier: 120612619
GI number: 120612619
Start: 4410946
End: 4413117
Strand: Direct
Name: cphA [H]
Synonym: Aave_3980
Alternate gene names: 120612619
Gene position: 4410946-4413117 (Clockwise)
Preceding gene: 120612615
Following gene: 120612620
Centisome position: 82.4
GC content: 70.53
Gene sequence:
>2172_bases ATGGCGACTTTCAATGACATCCAACTGCTGCGCATCACCTACCTGCGCGGCCCCAGCGTCTGGACCTATCGTCCCATCCT CGAGGTCTGGCTGGACCTGGGCGAGCTGGAGGACTGGCCGTCGAACAAGATCCCCGGCCTCAACGAACGCCTGACCGCCT GGCTGCCGGCCCTGATCGAGCACCACTGCGGCGTGGGCGAGCGCGGCGGGTTCATCCAGCGCCTGGAAGGCGGTACCTGG ATGGGCCACGTGCTGGAGCACATCGTGATCGAGCTGCTGAACCTGGCGGGCATGCCGGCCGAATTCGGCCAGACGCGCGA GATCTCCCGGCGCGGCGTGTACCGCATGGTCTTCCGCTGCCCCGAGGAGGATGTGGCGCGCACAGCGCTCGCCTGGGGCC ACAAGCTGCTGATGGCGGCCATCAACGACCAGCCCTTCGACGTCAAGCCGGCCATCCAGGCCATCAAGACCAGCATCAAC GACAGCTACCTGGGCCCCAGCACCGGCAGCATCGTGGACGCGGCGGGCGAGCGCCGCATCCCGCACATCCGCCTCAACGA CGGCAACCTGGTGCAACTGGGCTACGGCGCGGCGCAGCGCCGCATCTGGACGGCCGAGAGCGACCAGACCAGCGCCATCG CCGAAGGCATCGCCCAGGACAAGGACTTCACCAAGCGCCTGCTGGCCGCCTGCGGCGTGCCGGTGCCCGAAGGCCGCGTG GTCGCCGACGCCCAGGAGGCCTGGGAGGTCGCGCAGGACATCGGTTTTCCCGTCACCGTCAAGCCGTCGGACGGCAACCA CGCACGCGGCGTGACGCTGGAGCTGTACGGCGAGGCCGAGATCAAGGCCGCCTTCGCCCTGGCCGAGCCCGAGGGGTCGG CGGTGATCGTCGAGCGCTTCATCGAGGGCACCGAACACCGCCTGCTGGTGGTGGGCGGCAAGGTGGTGGCGGCCTGCCGC GGCGAGACGGTCAGCGTCTCGGGCAATGGCCGCTCCACGCTGCGCGAGCTGGTGGACGTGGTCAACCAGGATCCCCGGCG CGGCCCCGAGCAGGAGTACCCCCTCGACTGGATCAAGCTGGACGCGCCCGCCGTGCAGCTGGAGCTGCAGCGCCAGGGCG TCACGCCCGACACCGTGCCCGCACAGGGCCAAAGCATCCTGCTGCAGCGCAACGGCAACATGGCCATCGACTGCACGGAC GAGGTGCATCCCGACGTCGCCTACTACGCCCAGCTGGCGGCCAAGATCGTGGGCCTGGACATCGCCGGCATGGACATGAT CCTGCAGGACGTCTCCCGGCCCATGAAGGAGCAGCGCGGCGCCATCCTCGAGGTGAACGCCGGCCCCGGCCTGCTGATGC ACCTCAAGCCCACCAGCGGCACGCCCCGCCCCGTGGGCATGGCCATCGTGGACCACCTCTTCCCGCGCACCGACGAGGGC ACGGGCGCGGGGCGCATCCCGCTGGTGGGCATCGCCGGCACGCAGGGCAACGCCTTCATCGCGCGGCTGGTGGGCTGGCT GCTGCAACTCTCGGGCAAGCTCACCGGCGTGGCCTGCAGCGAGGGCATGTTCCTGTCCAACCGCCAGACCCAGAAGACCG ACACCGCCCACTGGGCCGGCGCCCACCGCCTGCTGACCAACCGCCTGGCCGAGGCCGCGGTGGTGCAGACCACGGCCCGC TCCATCCTGGAGGAGGGCCTGGCCTACGACCGCTGCCTGGTCGGCGTGGTCACCGACATGCAGGGCTGGGAACAGCTGGC CGACCACGACGTGCTCGAGCCCGCGCAGATGACCCGCGTGATGCGCACGCAGATCGACCTGGTGCTCGACGAGGGCGCGG GCGTGCTCAACGCCGACGACGCCCAGGTGGCGGACCTGGGGCGCCTGTGCGACGGCGAGGTGCTGTTCTACGCGCTGCAG GCCGACAATCCGGTGGTGGCCGGGCATCGCGCCGGGAAGGACGGCCGCGCCGTCTTCGTGCAGGACGGCAACGTGGTGCT GGCCTCCGGGGCCAAGGAGCGGGTCCTGGGCACGCTGGCGAGCCTGACGCTGGCCGGCGGCAGGCGGCCCGATACGGCGG CCCTGCTGGCCGCCATCGCCACGGCCTGGGCCATGGACATCACGCCCGACCTGATTGCCGCCGGCATCAAGACCTTCGAG TATCCGAATTGA
Upstream 100 bases:
>100_bases ACAGGGTGTTCCCGCCCCTGCACTTCAGCGCACAATCGCACCAGGTTCCTTACGCATTCCCGGCTCCCCGCGGGCCGCAG ATTCCTTTACGCTGCACTCC
Downstream 100 bases:
>100_bases TCCGCGACCCGATCGACAGCGGCCTGCGCACGGCAGGCCAGCGCTAAGGCCCCATTTCGCCCCCGAGAGCAATTCCATGC AGATCTCCCGAATCCGCGCC
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MATFNDIQLLRITYLRGPSVWTYRPILEVWLDLGELEDWPSNKIPGLNERLTAWLPALIEHHCGVGERGGFIQRLEGGTW MGHVLEHIVIELLNLAGMPAEFGQTREISRRGVYRMVFRCPEEDVARTALAWGHKLLMAAINDQPFDVKPAIQAIKTSIN DSYLGPSTGSIVDAAGERRIPHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIAQDKDFTKRLLAACGVPVPEGRV VADAQEAWEVAQDIGFPVTVKPSDGNHARGVTLELYGEAEIKAAFALAEPEGSAVIVERFIEGTEHRLLVVGGKVVAACR GETVSVSGNGRSTLRELVDVVNQDPRRGPEQEYPLDWIKLDAPAVQLELQRQGVTPDTVPAQGQSILLQRNGNMAIDCTD EVHPDVAYYAQLAAKIVGLDIAGMDMILQDVSRPMKEQRGAILEVNAGPGLLMHLKPTSGTPRPVGMAIVDHLFPRTDEG TGAGRIPLVGIAGTQGNAFIARLVGWLLQLSGKLTGVACSEGMFLSNRQTQKTDTAHWAGAHRLLTNRLAEAAVVQTTAR SILEEGLAYDRCLVGVVTDMQGWEQLADHDVLEPAQMTRVMRTQIDLVLDEGAGVLNADDAQVADLGRLCDGEVLFYALQ ADNPVVAGHRAGKDGRAVFVQDGNVVLASGAKERVLGTLASLTLAGGRRPDTAALLAAIATAWAMDITPDLIAAGIKTFE YPN
Sequences:
>Translated_723_residues MATFNDIQLLRITYLRGPSVWTYRPILEVWLDLGELEDWPSNKIPGLNERLTAWLPALIEHHCGVGERGGFIQRLEGGTW MGHVLEHIVIELLNLAGMPAEFGQTREISRRGVYRMVFRCPEEDVARTALAWGHKLLMAAINDQPFDVKPAIQAIKTSIN DSYLGPSTGSIVDAAGERRIPHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIAQDKDFTKRLLAACGVPVPEGRV VADAQEAWEVAQDIGFPVTVKPSDGNHARGVTLELYGEAEIKAAFALAEPEGSAVIVERFIEGTEHRLLVVGGKVVAACR GETVSVSGNGRSTLRELVDVVNQDPRRGPEQEYPLDWIKLDAPAVQLELQRQGVTPDTVPAQGQSILLQRNGNMAIDCTD EVHPDVAYYAQLAAKIVGLDIAGMDMILQDVSRPMKEQRGAILEVNAGPGLLMHLKPTSGTPRPVGMAIVDHLFPRTDEG TGAGRIPLVGIAGTQGNAFIARLVGWLLQLSGKLTGVACSEGMFLSNRQTQKTDTAHWAGAHRLLTNRLAEAAVVQTTAR SILEEGLAYDRCLVGVVTDMQGWEQLADHDVLEPAQMTRVMRTQIDLVLDEGAGVLNADDAQVADLGRLCDGEVLFYALQ ADNPVVAGHRAGKDGRAVFVQDGNVVLASGAKERVLGTLASLTLAGGRRPDTAALLAAIATAWAMDITPDLIAAGIKTFE YPN >Mature_722_residues ATFNDIQLLRITYLRGPSVWTYRPILEVWLDLGELEDWPSNKIPGLNERLTAWLPALIEHHCGVGERGGFIQRLEGGTWM GHVLEHIVIELLNLAGMPAEFGQTREISRRGVYRMVFRCPEEDVARTALAWGHKLLMAAINDQPFDVKPAIQAIKTSIND SYLGPSTGSIVDAAGERRIPHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIAQDKDFTKRLLAACGVPVPEGRVV ADAQEAWEVAQDIGFPVTVKPSDGNHARGVTLELYGEAEIKAAFALAEPEGSAVIVERFIEGTEHRLLVVGGKVVAACRG ETVSVSGNGRSTLRELVDVVNQDPRRGPEQEYPLDWIKLDAPAVQLELQRQGVTPDTVPAQGQSILLQRNGNMAIDCTDE VHPDVAYYAQLAAKIVGLDIAGMDMILQDVSRPMKEQRGAILEVNAGPGLLMHLKPTSGTPRPVGMAIVDHLFPRTDEGT GAGRIPLVGIAGTQGNAFIARLVGWLLQLSGKLTGVACSEGMFLSNRQTQKTDTAHWAGAHRLLTNRLAEAAVVQTTARS ILEEGLAYDRCLVGVVTDMQGWEQLADHDVLEPAQMTRVMRTQIDLVLDEGAGVLNADDAQVADLGRLCDGEVLFYALQA DNPVVAGHRAGKDGRAVFVQDGNVVLASGAKERVLGTLASLTLAGGRRPDTAALLAAIATAWAMDITPDLIAAGIKTFEY PN
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 78061; Mature: 77930
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFNDIQLLRITYLRGPSVWTYRPILEVWLDLGELEDWPSNKIPGLNERLTAWLPALIE CCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HHCGVGERGGFIQRLEGGTWMGHVLEHIVIELLNLAGMPAEFGQTREISRRGVYRMVFRC HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCHHHHHHCC PEEDVARTALAWGHKLLMAAINDQPFDVKPAIQAIKTSINDSYLGPSTGSIVDAAGERRI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCC PHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIAQDKDFTKRLLAACGVPVPEGRV CEEEECCCCEEEECCCCHHCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE VADAQEAWEVAQDIGFPVTVKPSDGNHARGVTLELYGEAEIKAAFALAEPEGSAVIVERF EECHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHH IEGTEHRLLVVGGKVVAACRGETVSVSGNGRSTLRELVDVVNQDPRRGPEQEYPLDWIKL HCCCCCEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE DAPAVQLELQRQGVTPDTVPAQGQSILLQRNGNMAIDCTDEVHPDVAYYAQLAAKIVGLD CCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCC IAGMDMILQDVSRPMKEQRGAILEVNAGPGLLMHLKPTSGTPRPVGMAIVDHLFPRTDEG HHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCC TGAGRIPLVGIAGTQGNAFIARLVGWLLQLSGKLTGVACSEGMFLSNRQTQKTDTAHWAG CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCHHHHH AHRLLTNRLAEAAVVQTTARSILEEGLAYDRCLVGVVTDMQGWEQLADHDVLEPAQMTRV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MRTQIDLVLDEGAGVLNADDAQVADLGRLCDGEVLFYALQADNPVVAGHRAGKDGRAVFV HHHHHHEEEECCCCEECCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCEEEE QDGNVVLASGAKERVLGTLASLTLAGGRRPDTAALLAAIATAWAMDITPDLIAAGIKTFE ECCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC YPN CCC >Mature Secondary Structure ATFNDIQLLRITYLRGPSVWTYRPILEVWLDLGELEDWPSNKIPGLNERLTAWLPALIE CCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HHCGVGERGGFIQRLEGGTWMGHVLEHIVIELLNLAGMPAEFGQTREISRRGVYRMVFRC HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCHHHHHHCC PEEDVARTALAWGHKLLMAAINDQPFDVKPAIQAIKTSINDSYLGPSTGSIVDAAGERRI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCC PHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIAQDKDFTKRLLAACGVPVPEGRV CEEEECCCCEEEECCCCHHCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE VADAQEAWEVAQDIGFPVTVKPSDGNHARGVTLELYGEAEIKAAFALAEPEGSAVIVERF EECHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHH IEGTEHRLLVVGGKVVAACRGETVSVSGNGRSTLRELVDVVNQDPRRGPEQEYPLDWIKL HCCCCCEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE DAPAVQLELQRQGVTPDTVPAQGQSILLQRNGNMAIDCTDEVHPDVAYYAQLAAKIVGLD CCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCC IAGMDMILQDVSRPMKEQRGAILEVNAGPGLLMHLKPTSGTPRPVGMAIVDHLFPRTDEG HHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCC TGAGRIPLVGIAGTQGNAFIARLVGWLLQLSGKLTGVACSEGMFLSNRQTQKTDTAHWAG CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCHHHHH AHRLLTNRLAEAAVVQTTARSILEEGLAYDRCLVGVVTDMQGWEQLADHDVLEPAQMTRV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MRTQIDLVLDEGAGVLNADDAQVADLGRLCDGEVLFYALQADNPVVAGHRAGKDGRAVFV HHHHHHEEEECCCCEECCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCEEEE QDGNVVLASGAKERVLGTLASLTLAGGRRPDTAALLAAIATAWAMDITPDLIAAGIKTFE ECCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC YPN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11131019 [H]