Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612606

Identifier: 120612606

GI number: 120612606

Start: 4397439

End: 4397792

Strand: Direct

Name: 120612606

Synonym: Aave_3967

Alternate gene names: NA

Gene position: 4397439-4397792 (Clockwise)

Preceding gene: 120612600

Following gene: 120612607

Centisome position: 82.15

GC content: 59.6

Gene sequence:

>354_bases
ATGTCTGAAATCAAACCCGGCACCCGTGCAACCCAGTCCGTTCTTGACCACCACCTGAACGCATTCCCCCAGGGAATAGA
GGAACTACTGAAGGACTACGACGAGAGCTCGGCGCTTGTCACGCCGGACAAGACGTTCAAGGGACGCAAGGAGATAGAAG
GATTCTTCCAGGCGTTCCTGGATGGGGCAGACCCGGCGTTCTGGCCGGCTTTCCGGATCACCAGCATGAGCACAGTCGGG
GAAGTGGCCTATCTCGTCTGGGAGGCCAAGCCGTTCGTCCCGATGGCGACGGACACTCTCTACGTGCGGGACGGAAAGAT
CGCAGTCCAGACCTTCACCGCGTTCTCGGCGTAG

Upstream 100 bases:

>100_bases
CATCGATATCGTGTGATCGCGCCGCGCCGATCGCGTGATGCGCTCCGACCGAGCTGCCCGATGGAGGTCGCTCCTGCAAC
ACAGTTTGGAGACACACCCC

Downstream 100 bases:

>100_bases
CGGGACAGTCGCGGAAGACATCCTCCAGTTCACCGTCGACGGGTCCTCACCGCCGTTGACGATCTGCCAGCGTGACTCCC
AGTCGAGCCGGCCCCCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVG
EVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA

Sequences:

>Translated_117_residues
MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVG
EVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA
>Mature_116_residues
SEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVGE
VAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13010; Mature: 12879

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH
DGADPAFWPAFRITSMSTVGEVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCEEEEEEECCCCC
>Mature Secondary Structure 
SEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH
DGADPAFWPAFRITSMSTVGEVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA