Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612600

Identifier: 120612600

GI number: 120612600

Start: 4390351

End: 4391049

Strand: Direct

Name: 120612600

Synonym: Aave_3961

Alternate gene names: NA

Gene position: 4390351-4391049 (Clockwise)

Preceding gene: 120612599

Following gene: 120612606

Centisome position: 82.02

GC content: 67.95

Gene sequence:

>699_bases
ATGGACCGCGACACGCCGTTGCGGTGCAACCTCGACTCCAGCGACCGCCACAGGCTCGCCAACGTAGCGACCAAGACCCA
CATGACGATCCGCCAGACACCCGTTACGCCGGCCGTACCGGGCGGTCCGTCCTGGCGCGTCAGCATCTATTTCGACGGCA
TGCCGGATGGAAGCACGCAGCAGAACGGCACCACCCTGAAGGGGGGCGTGGGACGGGTCTACCGCATGGCCTGCGAGGCG
GCGCAACTTGTCGCCAAGGCACTGCAGGCCGATCCGACGGTTCAGGTGTCGCACATCTGCGGCTTGTCCATGGGTGGGGG
CAGTGCGCAGATGTTCGCAGCGGTGCTGCAAGGCCACCTGCCGTGGGCCCCACCCCCGGCAGTGGTGCTGCTCGATCCGA
TGCTGCTCAACCCGAAGCAGAAGGCGCACGCTTTGGCGCAGAGCCCCCATGGCTACGATTTCACCCAGCCACGCGGCATC
GCGCTGACCCTGGACTACGCGGCCAATCCCCGCAAATGCCTCATGGACCGCCAGCACGCCATCGGTCGATCGTCCGAGGG
ACTGGTCCGGTTGAGGTTGGGGCTGACCGACCGTGACGGGTTGGGCGGCACGCCTCCGAAGCCCTACGGGCCGCCGGGCA
CGGGCTACCACGGGAACCGCCACCACTACGAGGCCGCGCTGGCGCGCTTCACACGCTGA

Upstream 100 bases:

>100_bases
CTATCTACCGGCTCCAGCGCTTGCCGAAGGCATTCGCCAAAGCCTGGCAGCACTGGACATGGGCGTGTTCTCGGTCTATG
ACAATATGCACATCGTCAAC

Downstream 100 bases:

>100_bases
ATCCAGGCTACAGCTGGAACCCGACCGCCCGGATCACGCCTTCGGCGATGTCCCGCGGCCACGACGGCGGGCGGGCATGC
AGGCGCCGGGCCCGGTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDRDTPLRCNLDSSDRHRLANVATKTHMTIRQTPVTPAVPGGPSWRVSIYFDGMPDGSTQQNGTTLKGGVGRVYRMACEA
AQLVAKALQADPTVQVSHICGLSMGGGSAQMFAAVLQGHLPWAPPPAVVLLDPMLLNPKQKAHALAQSPHGYDFTQPRGI
ALTLDYAANPRKCLMDRQHAIGRSSEGLVRLRLGLTDRDGLGGTPPKPYGPPGTGYHGNRHHYEAALARFTR

Sequences:

>Translated_232_residues
MDRDTPLRCNLDSSDRHRLANVATKTHMTIRQTPVTPAVPGGPSWRVSIYFDGMPDGSTQQNGTTLKGGVGRVYRMACEA
AQLVAKALQADPTVQVSHICGLSMGGGSAQMFAAVLQGHLPWAPPPAVVLLDPMLLNPKQKAHALAQSPHGYDFTQPRGI
ALTLDYAANPRKCLMDRQHAIGRSSEGLVRLRLGLTDRDGLGGTPPKPYGPPGTGYHGNRHHYEAALARFTR
>Mature_232_residues
MDRDTPLRCNLDSSDRHRLANVATKTHMTIRQTPVTPAVPGGPSWRVSIYFDGMPDGSTQQNGTTLKGGVGRVYRMACEA
AQLVAKALQADPTVQVSHICGLSMGGGSAQMFAAVLQGHLPWAPPPAVVLLDPMLLNPKQKAHALAQSPHGYDFTQPRGI
ALTLDYAANPRKCLMDRQHAIGRSSEGLVRLRLGLTDRDGLGGTPPKPYGPPGTGYHGNRHHYEAALARFTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24974; Mature: 24974

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDTPLRCNLDSSDRHRLANVATKTHMTIRQTPVTPAVPGGPSWRVSIYFDGMPDGSTQ
CCCCCCCEECCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
QNGTTLKGGVGRVYRMACEAAQLVAKALQADPTVQVSHICGLSMGGGSAQMFAAVLQGHL
CCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEECCCCCHHHHHHHHHHCCC
PWAPPPAVVLLDPMLLNPKQKAHALAQSPHGYDFTQPRGIALTLDYAANPRKCLMDRQHA
CCCCCCCEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
IGRSSEGLVRLRLGLTDRDGLGGTPPKPYGPPGTGYHGNRHHYEAALARFTR
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDRDTPLRCNLDSSDRHRLANVATKTHMTIRQTPVTPAVPGGPSWRVSIYFDGMPDGSTQ
CCCCCCCEECCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
QNGTTLKGGVGRVYRMACEAAQLVAKALQADPTVQVSHICGLSMGGGSAQMFAAVLQGHL
CCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEECCCCCHHHHHHHHHHCCC
PWAPPPAVVLLDPMLLNPKQKAHALAQSPHGYDFTQPRGIALTLDYAANPRKCLMDRQHA
CCCCCCCEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
IGRSSEGLVRLRLGLTDRDGLGGTPPKPYGPPGTGYHGNRHHYEAALARFTR
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA