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The map label for this gene is yecD [C]

Identifier: 120612570

GI number: 120612570

Start: 4356562

End: 4357236

Strand: Direct

Name: yecD [C]

Synonym: Aave_3931

Alternate gene names: 120612570

Gene position: 4356562-4357236 (Clockwise)

Preceding gene: 120612569

Following gene: 120612571

Centisome position: 81.39

GC content: 71.85

Gene sequence:

>675_bases
ATGACGAACCCCACCACCAGCGCCCAGAGCATCCCCGCCGGGGGCGTGCAGGGCGACATCTCCGCCTACGCCCGCCAGGG
CTTCGGCACGCCGCTGCCGCTCAAGGCGCCCTTCGGCCTGCTCATCATCGACTTCGTGAACGGCTTCGCCGACCCGGCCG
TGTTCGGCGGCGGCAACATTCCCGCGGCGATCGAGCGCACGCGCGGCCTGCTGGCCCATGCGCGCGAACGCGGCTGGCCC
GTGGCGCACAGCCGCATCGTGTTCTCGGACGACGACGCGGACAGCAACATCTTCTGCCTGAAGGTGCCCGGCATGCTGAC
GCTGAAGGAAGACAGCCCGGCCAGCGCCATCGTGCCCGAGCTGGCCCCCGCCCCGGGCGAATACGTGGTGCGCAAGAGCA
CGCCCTCGGCCTTCTTCGGCACCATGCTCGCGCCCTGGCTGGCCCAGCGCGGCGTGCAGACGCTGCTGGTGGCCGGCTGC
GTGACCAGCGGCTGCGTGCGCGCCAGCGTGGTCGATGCCATGCAGTCGGGCTTCCGTCCCCTGGTGGTGGCCGACTGCTG
CGGCGACCGCGCCCTTGGCCCCCACGAGGCCAACCTGTTCGACATGGCGCAGAAGTACGCGGCCGTGATGCCCCTCGACC
AGGCCCTGGCCGATACCGGCGCGCTCGCGCGTTGA

Upstream 100 bases:

>100_bases
TGGCGCTGGACGGCACGCCCGTGGTGATCGACGGCGTGGTGCAGGACGAAGCAGGACTGGCACGCGCTGCCAGAAAATCC
CGGCAAGGCAAGGACATCGC

Downstream 100 bases:

>100_bases
GATAACGCCGCTCCATGAACCTGCCCCGGCCCCACGACCTGCACGCCCCGCTGCTGGACCGCCCCGACACCCTGCTCGTG
GTGCGCCAGCCCGTGGCGCC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTNPTTSAQSIPAGGVQGDISAYARQGFGTPLPLKAPFGLLIIDFVNGFADPAVFGGGNIPAAIERTRGLLAHARERGWP
VAHSRIVFSDDDADSNIFCLKVPGMLTLKEDSPASAIVPELAPAPGEYVVRKSTPSAFFGTMLAPWLAQRGVQTLLVAGC
VTSGCVRASVVDAMQSGFRPLVVADCCGDRALGPHEANLFDMAQKYAAVMPLDQALADTGALAR

Sequences:

>Translated_224_residues
MTNPTTSAQSIPAGGVQGDISAYARQGFGTPLPLKAPFGLLIIDFVNGFADPAVFGGGNIPAAIERTRGLLAHARERGWP
VAHSRIVFSDDDADSNIFCLKVPGMLTLKEDSPASAIVPELAPAPGEYVVRKSTPSAFFGTMLAPWLAQRGVQTLLVAGC
VTSGCVRASVVDAMQSGFRPLVVADCCGDRALGPHEANLFDMAQKYAAVMPLDQALADTGALAR
>Mature_223_residues
TNPTTSAQSIPAGGVQGDISAYARQGFGTPLPLKAPFGLLIIDFVNGFADPAVFGGGNIPAAIERTRGLLAHARERGWPV
AHSRIVFSDDDADSNIFCLKVPGMLTLKEDSPASAIVPELAPAPGEYVVRKSTPSAFFGTMLAPWLAQRGVQTLLVAGCV
TSGCVRASVVDAMQSGFRPLVVADCCGDRALGPHEANLFDMAQKYAAVMPLDQALADTGALAR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 23369; Mature: 23238

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPTTSAQSIPAGGVQGDISAYARQGFGTPLPLKAPFGLLIIDFVNGFADPAVFGGGNI
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCC
PAAIERTRGLLAHARERGWPVAHSRIVFSDDDADSNIFCLKVPGMLTLKEDSPASAIVPE
CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCCCCCHHHCCC
LAPAPGEYVVRKSTPSAFFGTMLAPWLAQRGVQTLLVAGCVTSGCVRASVVDAMQSGFRP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVVADCCGDRALGPHEANLFDMAQKYAAVMPLDQALADTGALAR
EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCC
>Mature Secondary Structure 
TNPTTSAQSIPAGGVQGDISAYARQGFGTPLPLKAPFGLLIIDFVNGFADPAVFGGGNI
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCC
PAAIERTRGLLAHARERGWPVAHSRIVFSDDDADSNIFCLKVPGMLTLKEDSPASAIVPE
CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCCCCCHHHCCC
LAPAPGEYVVRKSTPSAFFGTMLAPWLAQRGVQTLLVAGCVTSGCVRASVVDAMQSGFRP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVVADCCGDRALGPHEANLFDMAQKYAAVMPLDQALADTGALAR
EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]