Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612569
Identifier: 120612569
GI number: 120612569
Start: 4355480
End: 4356565
Strand: Direct
Name: 120612569
Synonym: Aave_3930
Alternate gene names: NA
Gene position: 4355480-4356565 (Clockwise)
Preceding gene: 120612568
Following gene: 120612570
Centisome position: 81.37
GC content: 69.52
Gene sequence:
>1086_bases ATGTCCGTCAGCGACAACGATCTGATCCACGCCTGGAAGCAGGTGCTCACGCTGTCCCGGCTCGAGCCCGGCCAGACGGT CACCGTGCTCACGGGCGCCGACACGCATCCGCAGACGCTGCGCTGCGCGATCGCGGCCTCCAGCGACCTGGGCGCGCGCG TCAACCGGCTGGACCTGCCGCCCGTCAACGCCGAGAAGTCGCTCAGCCGCGATTCGCTGGCCTACCTGGGCACCACGCCC CTGACCGGCAACCCGGCCGCCATCGCCGCGCTCAAGGCGAGCGACCTGGTGCTCGACCTCATGACCCTGCTGTTCTCCCC CGAGCAGCACGAGATCCTGCAGACCGGCACCAAGATCCTGCTGGCCGTGGAGCCGCCCGAGGTGCTGTGCCGCCTGGTGC CCACGGAGGCCGACCGCGCGCGCGTGCAGGCCGCATCGAAGCGCATCGAGGCGGCCAAGCAGATGCACATCACCTCCGCG GCCGGCACCGACCTGCGCTGCGCCTTGGGCGAGTTCCCCGCCATCTGCGAATACGGCTTCGTGGACGAGCCCGGCCGCTG GGACCACTGGCCCAGCGGCTTCGTGCTGACCTGGCCCGACGAGGGCCGGAGCCACGGCCGCGTGGTGCTGGACCGCGGCG ACATCCTGCTGCCCATGAAGGACTACGTGACCGATCCCATCGAACTCACGATTGAGCAGGGCTACGTGACGCGCATCGGC GGCGGCCTGCAGGCCGAGATCCTCAAGGAGTACATGGCCTCCTACGAGGACCCGGAGGCCTACGCCGTCTCCCACGTCGG CTGGGGGCTGCAGCCGCGCGCCCACTGGTCGATGCTGGCGCACTACAACAAGGAGACCCACATCGGCATGGACGCGCGCG CCTTCGAGGGCAACTTCCTCTGGTCCATGGGCCCCAACAACGAGGCCGGCGGCAGCCGCACCACCGCCTGCCACATCGAC ATTCCGATGCGCCACTGCACGGTGGCGCTGGACGGCACGCCCGTGGTGATCGACGGCGTGGTGCAGGACGAAGCAGGACT GGCACGCGCTGCCAGAAAATCCCGGCAAGGCAAGGACATCGCATGA
Upstream 100 bases:
>100_bases CCGGTTTCTACGCAGCGCTCGGCGACTTCCTCGGGACCAAGGTCGACTGAATGCCCGCCTGTCGCACCCTCTCCGCCACC ACACCGCCAAGGAGCCCCGC
Downstream 100 bases:
>100_bases CGAACCCCACCACCAGCGCCCAGAGCATCCCCGCCGGGGGCGTGCAGGGCGACATCTCCGCCTACGCCCGCCAGGGCTTC GGCACGCCGCTGCCGCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSVSDNDLIHAWKQVLTLSRLEPGQTVTVLTGADTHPQTLRCAIAASSDLGARVNRLDLPPVNAEKSLSRDSLAYLGTTP LTGNPAAIAALKASDLVLDLMTLLFSPEQHEILQTGTKILLAVEPPEVLCRLVPTEADRARVQAASKRIEAAKQMHITSA AGTDLRCALGEFPAICEYGFVDEPGRWDHWPSGFVLTWPDEGRSHGRVVLDRGDILLPMKDYVTDPIELTIEQGYVTRIG GGLQAEILKEYMASYEDPEAYAVSHVGWGLQPRAHWSMLAHYNKETHIGMDARAFEGNFLWSMGPNNEAGGSRTTACHID IPMRHCTVALDGTPVVIDGVVQDEAGLARAARKSRQGKDIA
Sequences:
>Translated_361_residues MSVSDNDLIHAWKQVLTLSRLEPGQTVTVLTGADTHPQTLRCAIAASSDLGARVNRLDLPPVNAEKSLSRDSLAYLGTTP LTGNPAAIAALKASDLVLDLMTLLFSPEQHEILQTGTKILLAVEPPEVLCRLVPTEADRARVQAASKRIEAAKQMHITSA AGTDLRCALGEFPAICEYGFVDEPGRWDHWPSGFVLTWPDEGRSHGRVVLDRGDILLPMKDYVTDPIELTIEQGYVTRIG GGLQAEILKEYMASYEDPEAYAVSHVGWGLQPRAHWSMLAHYNKETHIGMDARAFEGNFLWSMGPNNEAGGSRTTACHID IPMRHCTVALDGTPVVIDGVVQDEAGLARAARKSRQGKDIA >Mature_360_residues SVSDNDLIHAWKQVLTLSRLEPGQTVTVLTGADTHPQTLRCAIAASSDLGARVNRLDLPPVNAEKSLSRDSLAYLGTTPL TGNPAAIAALKASDLVLDLMTLLFSPEQHEILQTGTKILLAVEPPEVLCRLVPTEADRARVQAASKRIEAAKQMHITSAA GTDLRCALGEFPAICEYGFVDEPGRWDHWPSGFVLTWPDEGRSHGRVVLDRGDILLPMKDYVTDPIELTIEQGYVTRIGG GLQAEILKEYMASYEDPEAYAVSHVGWGLQPRAHWSMLAHYNKETHIGMDARAFEGNFLWSMGPNNEAGGSRTTACHIDI PMRHCTVALDGTPVVIDGVVQDEAGLARAARKSRQGKDIA
Specific function: Unknown
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39276; Mature: 39145
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSDNDLIHAWKQVLTLSRLEPGQTVTVLTGADTHPQTLRCAIAASSDLGARVNRLDLP CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEECCC PVNAEKSLSRDSLAYLGTTPLTGNPAAIAALKASDLVLDLMTLLFSPEQHEILQTGTKIL CCCCHHHCCCCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHCCCEEE LAVEPPEVLCRLVPTEADRARVQAASKRIEAAKQMHITSAAGTDLRCALGEFPAICEYGF EEECCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHCCCCCHHCCCC VDEPGRWDHWPSGFVLTWPDEGRSHGRVVLDRGDILLPMKDYVTDPIELTIEQGYVTRIG CCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEEEEHHHHCCCCEEEEEECCEEEEEC GGLQAEILKEYMASYEDPEAYAVSHVGWGLQPRAHWSMLAHYNKETHIGMDARAFEGNFL CCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEE WSMGPNNEAGGSRTTACHIDIPMRHCTVALDGTPVVIDGVVQDEAGLARAARKSRQGKDI EECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCC A C >Mature Secondary Structure SVSDNDLIHAWKQVLTLSRLEPGQTVTVLTGADTHPQTLRCAIAASSDLGARVNRLDLP CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEECCC PVNAEKSLSRDSLAYLGTTPLTGNPAAIAALKASDLVLDLMTLLFSPEQHEILQTGTKIL CCCCHHHCCCCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHCCCEEE LAVEPPEVLCRLVPTEADRARVQAASKRIEAAKQMHITSAAGTDLRCALGEFPAICEYGF EEECCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHCCCCCHHCCCC VDEPGRWDHWPSGFVLTWPDEGRSHGRVVLDRGDILLPMKDYVTDPIELTIEQGYVTRIG CCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEEEEHHHHCCCCEEEEEECCEEEEEC GGLQAEILKEYMASYEDPEAYAVSHVGWGLQPRAHWSMLAHYNKETHIGMDARAFEGNFL CCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEE WSMGPNNEAGGSRTTACHIDIPMRHCTVALDGTPVVIDGVVQDEAGLARAARKSRQGKDI EECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA