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The map label for this gene is yagR [C]

Identifier: 120612571

GI number: 120612571

Start: 4357251

End: 4359545

Strand: Direct

Name: yagR [C]

Synonym: Aave_3932

Alternate gene names: 120612571

Gene position: 4357251-4359545 (Clockwise)

Preceding gene: 120612570

Following gene: 120612572

Centisome position: 81.4

GC content: 73.64

Gene sequence:

>2295_bases
ATGAACCTGCCCCGGCCCCACGACCTGCACGCCCCGCTGCTGGACCGCCCCGACACCCTGCTCGTGGTGCGCCAGCCCGT
GGCGCCCCCGAAGCCCGCGCCGGGGCAGCCCGGCTCGGGTACCGACTACGTGCAGGCCACGCCCGAAATCTTCGTGGCGG
TGCTGGCCGACCCCGGTGCGGAAGCGGGCTGGCGCGCTCTGGCCTTCAATGGCCACGTGGACCTGGGCACGGGCATCCGC
ACCGCGCTGGCGCAGATCGTGGCCGAAGAACTGGAAGTGCCTTTGGCCCGGCTGGAGATGGTGCTGGGCCACACGGCCGC
ATCGCCCAACCAGGGGCCGACCATCGCCAGCGCGAGCATCCAGATTTCCGCGGTGCCGCTGCGCCGTGCGGCGGCCCAAG
CGCGCGAGCAACTGCTGGCGCTCGCAGCCGCGCAATGGGGCGTGGATGCCGGGCGCCTGCAGGCGCGGGATGGCGTCGTT
TACTTTGCCGACGGCGGCGATGCGCGCACGCTCCATTACGGACAACTATTGCAGAACCTGCAGGGACAGCGCCTGCACCT
GCCGCTGGCGCCGCCCGAGCAGCCGGTGAAGCTCAAGCCCGCGAGCGAATACCGGCTGGTGGGCCGCGGCGCTGCGCGCG
TGGACATTCCCGCCAAGGCCACCGGCGAGCTGAGCTTCGTGCACGACGTGCGCGTACCCGGCATGCGCCATGGCCGCGTC
GTGCGCCCGCCGCACCCCGGCCGCGACGGCGGCGATTTCATCGGCCATTGCCTCGTCGCCGTGGACCATGCCTCCGTCGC
GCATCTGCCCGGCAACGTGCAGGTGGTCACCGAGGGCGACTTCGTCGGCGTGGTCGCCGACCGCGAAGAACAGGCCATCG
CCGCCCTGCGCGCACTGCGCGTGCAATGGCGGCCCGTGCCGCCCGCGCCCGACCTGCGCGACGTGGCCGGCGCGATCCGT
GCGAACCCGGCGCAGCGCCGCGCGCTGGTGGACGAGGGCGACGTGGACGCCGCCTTCGCGGACCCGCGCACCGCCACGGT
GCTGGAGCGCAGCTACGTCTGGCCCTACCAGATGCACGCCTCCATCGGCCCCTCCTGCGCCGTCGCCGACTTCCAGGGCG
GGCGGCTCACCGTGTGGTCCGGCACGCAGAACCCGCACATGCTGCGCACCGACCTGGACCGGCTGCTGCGGCTGGGCGAG
GACCGCATCGACATCGTGCGCCTGGAGGCCGCGGGCTGCTATGGCCGCAACTGCGCCGACGATGTCTGCGCGGATGCCGC
CCTGCTGTCCATGGCCGTGGGCGCGCCGGTGCGCGTGCAGCTCACGCGAGAGCAGGAGCACCAGTGGGAGCCCAAGGGCA
CGGGCCAGCTCATGGACGTGCGCGCGGCCATCGGCCAGGGCGGAGAACTGCTGGCCTGCGACTTCGCCGTGCGCTACCCC
TCCAACGACGCGCCCCTGCTGGCCCTGCTGCTCACCGGCCGCGTGCCGGGCCAGCCGCGCACGCTGGAGATGGGCGACCG
CACCGCCGTGCCGCCCTACCGCTATGCGAGCCGCCGCATCGCCTGCCACGACATGGCACCGCTGGTGCGCTCCTCGTGGC
TGCGCGGCGTGTCGGCCCTGCCCAATTCCTTCGCCCACGACTGCATGATCGACGAGCTGGCCCAGGCGGCCGGCGCCGAT
CCGGTGGAATACCGCATCCGCCACCTGGACGACCCGCGCGCCATCGAGCTGATCGTCGCCACGGCCCGCCATGCGGGCTG
GCGGCGCGGGCAGCCGGGCAGCCGGGGCCGGCCCGGCGCCCAGGGTCTGCTGCGCGGGCGCGGCGTGGCCTATGCGCGCT
ACGTGCACAGCCGGTTTCCCGGCTTCGGCGCGGCCTGGGCCGCCTGGGTCGTGGACATCGAGGTCGATCCGGCGAGCGGC
CGCATCGCCGTGCGGCGCATCGTCGTCGGCCAGGACACGGGCATGATGGTCAACCCCGACGGCGTGCGCCACCAGATCCA
CGGCAACGTCATCCAGACCCTGAGCCGCAGCCTGCTGGAACGCGTCGCCTTCGACGAGCGGGGCGTGGCCAGCCGCGAAT
GGGGCGGCTATCCCATCATCGGCTTCCGCGACGTGCCGCCGATCGAAGTGGTGCTCATGCCGCGGCAGGACGAGCCGCCC
ATGGGCGCCGGCGAATCCGCCTCGGTGCCGGGCCCTGCCGCGCTGGCCAATGCGCTGTTCGACGCCACGGGGCGGCGCTT
CTACCGGGCGCCGTTCACCCCGGACGCCGTGCGGTCCGCACTCGGCAGTGCCTGA

Upstream 100 bases:

>100_bases
CCAACCTGTTCGACATGGCGCAGAAGTACGCGGCCGTGATGCCCCTCGACCAGGCCCTGGCCGATACCGGCGCGCTCGCG
CGTTGAGATAACGCCGCTCC

Downstream 100 bases:

>100_bases
CATGGAGGCGACGGACCTGGACAGCCTCGTGCTGCGCACGGCGAACGGCTGGCTGCAGGCCGGCGGGCGCGCGTGGCTGG
TGACCGTCGCACGCACCTGG

Product: isoquinoline 1-oxidoreductase

Products: NA

Alternate protein names: ALDH [H]

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MNLPRPHDLHAPLLDRPDTLLVVRQPVAPPKPAPGQPGSGTDYVQATPEIFVAVLADPGAEAGWRALAFNGHVDLGTGIR
TALAQIVAEELEVPLARLEMVLGHTAASPNQGPTIASASIQISAVPLRRAAAQAREQLLALAAAQWGVDAGRLQARDGVV
YFADGGDARTLHYGQLLQNLQGQRLHLPLAPPEQPVKLKPASEYRLVGRGAARVDIPAKATGELSFVHDVRVPGMRHGRV
VRPPHPGRDGGDFIGHCLVAVDHASVAHLPGNVQVVTEGDFVGVVADREEQAIAALRALRVQWRPVPPAPDLRDVAGAIR
ANPAQRRALVDEGDVDAAFADPRTATVLERSYVWPYQMHASIGPSCAVADFQGGRLTVWSGTQNPHMLRTDLDRLLRLGE
DRIDIVRLEAAGCYGRNCADDVCADAALLSMAVGAPVRVQLTREQEHQWEPKGTGQLMDVRAAIGQGGELLACDFAVRYP
SNDAPLLALLLTGRVPGQPRTLEMGDRTAVPPYRYASRRIACHDMAPLVRSSWLRGVSALPNSFAHDCMIDELAQAAGAD
PVEYRIRHLDDPRAIELIVATARHAGWRRGQPGSRGRPGAQGLLRGRGVAYARYVHSRFPGFGAAWAAWVVDIEVDPASG
RIAVRRIVVGQDTGMMVNPDGVRHQIHGNVIQTLSRSLLERVAFDERGVASREWGGYPIIGFRDVPPIEVVLMPRQDEPP
MGAGESASVPGPAALANALFDATGRRFYRAPFTPDAVRSALGSA

Sequences:

>Translated_764_residues
MNLPRPHDLHAPLLDRPDTLLVVRQPVAPPKPAPGQPGSGTDYVQATPEIFVAVLADPGAEAGWRALAFNGHVDLGTGIR
TALAQIVAEELEVPLARLEMVLGHTAASPNQGPTIASASIQISAVPLRRAAAQAREQLLALAAAQWGVDAGRLQARDGVV
YFADGGDARTLHYGQLLQNLQGQRLHLPLAPPEQPVKLKPASEYRLVGRGAARVDIPAKATGELSFVHDVRVPGMRHGRV
VRPPHPGRDGGDFIGHCLVAVDHASVAHLPGNVQVVTEGDFVGVVADREEQAIAALRALRVQWRPVPPAPDLRDVAGAIR
ANPAQRRALVDEGDVDAAFADPRTATVLERSYVWPYQMHASIGPSCAVADFQGGRLTVWSGTQNPHMLRTDLDRLLRLGE
DRIDIVRLEAAGCYGRNCADDVCADAALLSMAVGAPVRVQLTREQEHQWEPKGTGQLMDVRAAIGQGGELLACDFAVRYP
SNDAPLLALLLTGRVPGQPRTLEMGDRTAVPPYRYASRRIACHDMAPLVRSSWLRGVSALPNSFAHDCMIDELAQAAGAD
PVEYRIRHLDDPRAIELIVATARHAGWRRGQPGSRGRPGAQGLLRGRGVAYARYVHSRFPGFGAAWAAWVVDIEVDPASG
RIAVRRIVVGQDTGMMVNPDGVRHQIHGNVIQTLSRSLLERVAFDERGVASREWGGYPIIGFRDVPPIEVVLMPRQDEPP
MGAGESASVPGPAALANALFDATGRRFYRAPFTPDAVRSALGSA
>Mature_764_residues
MNLPRPHDLHAPLLDRPDTLLVVRQPVAPPKPAPGQPGSGTDYVQATPEIFVAVLADPGAEAGWRALAFNGHVDLGTGIR
TALAQIVAEELEVPLARLEMVLGHTAASPNQGPTIASASIQISAVPLRRAAAQAREQLLALAAAQWGVDAGRLQARDGVV
YFADGGDARTLHYGQLLQNLQGQRLHLPLAPPEQPVKLKPASEYRLVGRGAARVDIPAKATGELSFVHDVRVPGMRHGRV
VRPPHPGRDGGDFIGHCLVAVDHASVAHLPGNVQVVTEGDFVGVVADREEQAIAALRALRVQWRPVPPAPDLRDVAGAIR
ANPAQRRALVDEGDVDAAFADPRTATVLERSYVWPYQMHASIGPSCAVADFQGGRLTVWSGTQNPHMLRTDLDRLLRLGE
DRIDIVRLEAAGCYGRNCADDVCADAALLSMAVGAPVRVQLTREQEHQWEPKGTGQLMDVRAAIGQGGELLACDFAVRYP
SNDAPLLALLLTGRVPGQPRTLEMGDRTAVPPYRYASRRIACHDMAPLVRSSWLRGVSALPNSFAHDCMIDELAQAAGAD
PVEYRIRHLDDPRAIELIVATARHAGWRRGQPGSRGRPGAQGLLRGRGVAYARYVHSRFPGFGAAWAAWVVDIEVDPASG
RIAVRRIVVGQDTGMMVNPDGVRHQIHGNVIQTLSRSLLERVAFDERGVASREWGGYPIIGFRDVPPIEVVLMPRQDEPP
MGAGESASVPGPAALANALFDATGRRFYRAPFTPDAVRSALGSA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786478, Length=441, Percent_Identity=25.1700680272109, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.2.99.3 [H]

Molecular weight: Translated: 82088; Mature: 82088

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPRPHDLHAPLLDRPDTLLVVRQPVAPPKPAPGQPGSGTDYVQATPEIFVAVLADPGA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECCCC
EAGWRALAFNGHVDLGTGIRTALAQIVAEELEVPLARLEMVLGHTAASPNQGPTIASASI
CCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECEE
QISAVPLRRAAAQAREQLLALAAAQWGVDAGRLQARDGVVYFADGGDARTLHYGQLLQNL
EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCEEEEHHHHHHCC
QGQRLHLPLAPPEQPVKLKPASEYRLVGRGAARVDIPAKATGELSFVHDVRVPGMRHGRV
CCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCEE
VRPPHPGRDGGDFIGHCLVAVDHASVAHLPGNVQVVTEGDFVGVVADREEQAIAALRALR
ECCCCCCCCCHHHHHHHHHEECCCCEEECCCCEEEEECCCEEEEEECCHHHHHHHHHHHH
VQWRPVPPAPDLRDVAGAIRANPAQRRALVDEGDVDAAFADPRTATVLERSYVWPYQMHA
HEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEC
SIGPSCAVADFQGGRLTVWSGTQNPHMLRTDLDRLLRLGEDRIDIVRLEAAGCYGRNCAD
CCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHH
DVCADAALLSMAVGAPVRVQLTREQEHQWEPKGTGQLMDVRAAIGQGGELLACDFAVRYP
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCEEEEEEEEECC
SNDAPLLALLLTGRVPGQPRTLEMGDRTAVPPYRYASRRIACHDMAPLVRSSWLRGVSAL
CCCCCEEEEEEECCCCCCCCEEECCCCCCCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHC
PNSFAHDCMIDELAQAAGADPVEYRIRHLDDPRAIELIVATARHAGWRRGQPGSRGRPGA
CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCH
QGLLRGRGVAYARYVHSRFPGFGAAWAAWVVDIEVDPASGRIAVRRIVVGQDTGMMVNPD
HHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCEEECCC
GVRHQIHGNVIQTLSRSLLERVAFDERGVASREWGGYPIIGFRDVPPIEVVLMPRQDEPP
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCC
MGAGESASVPGPAALANALFDATGRRFYRAPFTPDAVRSALGSA
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLPRPHDLHAPLLDRPDTLLVVRQPVAPPKPAPGQPGSGTDYVQATPEIFVAVLADPGA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECCCC
EAGWRALAFNGHVDLGTGIRTALAQIVAEELEVPLARLEMVLGHTAASPNQGPTIASASI
CCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECEE
QISAVPLRRAAAQAREQLLALAAAQWGVDAGRLQARDGVVYFADGGDARTLHYGQLLQNL
EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCEEEEHHHHHHCC
QGQRLHLPLAPPEQPVKLKPASEYRLVGRGAARVDIPAKATGELSFVHDVRVPGMRHGRV
CCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCEE
VRPPHPGRDGGDFIGHCLVAVDHASVAHLPGNVQVVTEGDFVGVVADREEQAIAALRALR
ECCCCCCCCCHHHHHHHHHEECCCCEEECCCCEEEEECCCEEEEEECCHHHHHHHHHHHH
VQWRPVPPAPDLRDVAGAIRANPAQRRALVDEGDVDAAFADPRTATVLERSYVWPYQMHA
HEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEC
SIGPSCAVADFQGGRLTVWSGTQNPHMLRTDLDRLLRLGEDRIDIVRLEAAGCYGRNCAD
CCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHH
DVCADAALLSMAVGAPVRVQLTREQEHQWEPKGTGQLMDVRAAIGQGGELLACDFAVRYP
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCEEEEEEEEECC
SNDAPLLALLLTGRVPGQPRTLEMGDRTAVPPYRYASRRIACHDMAPLVRSSWLRGVSAL
CCCCCEEEEEEECCCCCCCCEEECCCCCCCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHC
PNSFAHDCMIDELAQAAGADPVEYRIRHLDDPRAIELIVATARHAGWRRGQPGSRGRPGA
CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCH
QGLLRGRGVAYARYVHSRFPGFGAAWAAWVVDIEVDPASGRIAVRRIVVGQDTGMMVNPD
HHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCEEECCC
GVRHQIHGNVIQTLSRSLLERVAFDERGVASREWGGYPIIGFRDVPPIEVVLMPRQDEPP
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCC
MGAGESASVPGPAALANALFDATGRRFYRAPFTPDAVRSALGSA
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2606906 [H]