Click here to switch to the map view.

The map label for this gene is 120612519

Identifier: 120612519

GI number: 120612519

Start: 4302498

End: 4302995

Strand: Direct

Name: 120612519

Synonym: Aave_3879

Alternate gene names: NA

Gene position: 4302498-4302995 (Clockwise)

Preceding gene: 120612518

Following gene: 120612520

Centisome position: 80.38

GC content: 61.85

Gene sequence:

>498_bases
ATGCCCACGACGACGAACCAGCGGACCCCTGCCGATGCCTGCAGCCTCCTGGATGCGGACCATCGGAAGGTGAAGAAGAT
GTTCAAGGAGTACGAAGAACTGGCCGGCTCCAAATCGAAGACGTCCGTCGCCAAGAAGCGCGAACTGGCGCAGCAGATCT
GCCTGGAGTTGACCGTGCATGCGCAGATCGAGGAGGAAATCTTCTATCCGGCCCTGCGCGACGCGCTGCGCGAAACCGAC
CTGCTCGACGAAGCCGAGGTCGAGCACGCCAGCGCCAAGGATCTCATTGCCCAGATCCAGGCCGGCGATGCCATGGACGA
CAAGTTCGACGCCAAGGTCACCGTCCTGGGCGAATACATCGACCACCACGTCAAGGAAGAGCGCAACGAAATCTTCGTCA
AGGCCCGCGCGGCACGCAAGCTCGACCTGGTGGCCATGCGCGACACGCTGCAGGCCCGCAAGGATGAATTGATGGAGGAA
ATGCAGGCCCTCGCCTGA

Upstream 100 bases:

>100_bases
CGCAGCGCCATGGGAAGACGGACACACAGGCGCCGCTCCTACGGCCAGGCGTGACGGTAAAAAGACAATGGGTTTTCCAA
CACCGTAAGAGGAAAACACC

Downstream 100 bases:

>100_bases
CCGGTCCGCCTGCCCTGCCGGGCTGCCCATGCAGCCATCCGGCCCCTCGCTGCGCCCGCATCCGCCCAACGGATGCGGGC
GTTCTGTCGTGTTGGCGCCA

Product: hemerythrin HHE cation-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPTTTNQRTPADACSLLDADHRKVKKMFKEYEELAGSKSKTSVAKKRELAQQICLELTVHAQIEEEIFYPALRDALRETD
LLDEAEVEHASAKDLIAQIQAGDAMDDKFDAKVTVLGEYIDHHVKEERNEIFVKARAARKLDLVAMRDTLQARKDELMEE
MQALA

Sequences:

>Translated_165_residues
MPTTTNQRTPADACSLLDADHRKVKKMFKEYEELAGSKSKTSVAKKRELAQQICLELTVHAQIEEEIFYPALRDALRETD
LLDEAEVEHASAKDLIAQIQAGDAMDDKFDAKVTVLGEYIDHHVKEERNEIFVKARAARKLDLVAMRDTLQARKDELMEE
MQALA
>Mature_164_residues
PTTTNQRTPADACSLLDADHRKVKKMFKEYEELAGSKSKTSVAKKRELAQQICLELTVHAQIEEEIFYPALRDALRETDL
LDEAEVEHASAKDLIAQIQAGDAMDDKFDAKVTVLGEYIDHHVKEERNEIFVKARAARKLDLVAMRDTLQARKDELMEEM
QALA

Specific function: Unknown

COG id: COG5592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18744; Mature: 18612

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTTNQRTPADACSLLDADHRKVKKMFKEYEELAGSKSKTSVAKKRELAQQICLELTVH
CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AQIEEEIFYPALRDALRETDLLDEAEVEHASAKDLIAQIQAGDAMDDKFDAKVTVLGEYI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DHHVKEERNEIFVKARAARKLDLVAMRDTLQARKDELMEEMQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTTTNQRTPADACSLLDADHRKVKKMFKEYEELAGSKSKTSVAKKRELAQQICLELTVH
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AQIEEEIFYPALRDALRETDLLDEAEVEHASAKDLIAQIQAGDAMDDKFDAKVTVLGEYI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DHHVKEERNEIFVKARAARKLDLVAMRDTLQARKDELMEEMQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA