Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612455
Identifier: 120612455
GI number: 120612455
Start: 4235827
End: 4236372
Strand: Reverse
Name: 120612455
Synonym: Aave_3814
Alternate gene names: NA
Gene position: 4236372-4235827 (Counterclockwise)
Preceding gene: 120612456
Following gene: 120612454
Centisome position: 79.14
GC content: 70.15
Gene sequence:
>546_bases ATGAAGATCCGCAGGTTTTTCATCCAGAAGGAGACGATTCCGCCGGCGCCGCAGCGGCCAGCGGCGCGGCAGGTGCAGCG GGTCGTCGCTGCCGCGGTGCTGGAAAACCCCTTCGCGGGCCGCTGGCAGGAAGAACTCTCGGCACTCTATCCGGCAGGCC ACGCGATCGGCGAGCGGCTGACTGCCGAGGCGCTGCGGCAGATCGACGGCGGCGCGGCCGCCGTGGAAGCCTACGGCAAG GGGGCCATCGTGGGATACGGCGGTGACATGGAACATGCGGCCGCGCTGCTGCATCCGCTGTTCGGCCGCGCTGTACGCGC AGGGCTGCCGGGCGCGCAGTCCATCATGCCCTCCACCGCGAAGCGGGGTGGGCCCGGCACCCTGCTGGACGTGCCGGTGC ACCATGTCCTGGACCCGTGGAGCTTCGATCATTTCGACGCGGTCACTTTCGGCATCGCCGAAGCGCCATTGCCGGAGGAG ATCGTGGTGGCGCTGGTGCTGTGCGCCGGTGGCCGCCCGATGGCGCGTGTCGCACCGCAGGCCTGA
Upstream 100 bases:
>100_bases GCATGCACGATGCGCTGGTGCTGCGCGTGTGCCGCGCCTATGAGCGGGCTCGCGGAGAGTTCCCCGCGCCGCCGCTGGAT GTGCGCAGGAAGGTGGCGCA
Downstream 100 bases:
>100_bases GCGGAGTTCGCGCCCGCATTCCCCCTGGCGCCGCCTGCCGGGAGATGCGTGGCGCACGCGGCGGCGACGGTCGCGTGCGC TATCATCCGGCGCAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKIRRFFIQKETIPPAPQRPAARQVQRVVAAAVLENPFAGRWQEELSALYPAGHAIGERLTAEALRQIDGGAAAVEAYGK GAIVGYGGDMEHAAALLHPLFGRAVRAGLPGAQSIMPSTAKRGGPGTLLDVPVHHVLDPWSFDHFDAVTFGIAEAPLPEE IVVALVLCAGGRPMARVAPQA
Sequences:
>Translated_181_residues MKIRRFFIQKETIPPAPQRPAARQVQRVVAAAVLENPFAGRWQEELSALYPAGHAIGERLTAEALRQIDGGAAAVEAYGK GAIVGYGGDMEHAAALLHPLFGRAVRAGLPGAQSIMPSTAKRGGPGTLLDVPVHHVLDPWSFDHFDAVTFGIAEAPLPEE IVVALVLCAGGRPMARVAPQA >Mature_181_residues MKIRRFFIQKETIPPAPQRPAARQVQRVVAAAVLENPFAGRWQEELSALYPAGHAIGERLTAEALRQIDGGAAAVEAYGK GAIVGYGGDMEHAAALLHPLFGRAVRAGLPGAQSIMPSTAKRGGPGTLLDVPVHHVLDPWSFDHFDAVTFGIAEAPLPEE IVVALVLCAGGRPMARVAPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19123; Mature: 19123
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRRFFIQKETIPPAPQRPAARQVQRVVAAAVLENPFAGRWQEELSALYPAGHAIGERL CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH TAEALRQIDGGAAAVEAYGKGAIVGYGGDMEHAAALLHPLFGRAVRAGLPGAQSIMPSTA HHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH KRGGPGTLLDVPVHHVLDPWSFDHFDAVTFGIAEAPLPEEIVVALVLCAGGRPMARVAPQ CCCCCCCEEECCHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC A C >Mature Secondary Structure MKIRRFFIQKETIPPAPQRPAARQVQRVVAAAVLENPFAGRWQEELSALYPAGHAIGERL CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH TAEALRQIDGGAAAVEAYGKGAIVGYGGDMEHAAALLHPLFGRAVRAGLPGAQSIMPSTA HHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH KRGGPGTLLDVPVHHVLDPWSFDHFDAVTFGIAEAPLPEEIVVALVLCAGGRPMARVAPQ CCCCCCCEEECCHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA