Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is solI [H]
Identifier: 120612452
GI number: 120612452
Start: 4232995
End: 4233630
Strand: Direct
Name: solI [H]
Synonym: Aave_3811
Alternate gene names: 120612452
Gene position: 4232995-4233630 (Clockwise)
Preceding gene: 120612451
Following gene: 120612453
Centisome position: 79.08
GC content: 66.98
Gene sequence:
>636_bases ATGATCGAAACCCTGACCGGCATCATCCCCGGCTCGCCCGGTGCCGAGGCACTCTACCGCTTCCGTCACCGGGTATTCGT AGAGCATGCCGGCTGGGAGCTTCCGTGCTACGGTCCGCTCGAATTCGATGAGTTCGACACGCCGCAGGCCGTCTATCTCG TGCGGCGCCATGCCGAAAGCAGGATCGCGGGCATGCTGCGCCTGCTGCCCACGACGCAGCCCTACATGATCCAGAGCCTG TGGCCCGAACTCATGGGCTCGCACCCGATTCCCTCGTCGCCCCGCGTGTGGGAAGCCACCCGCATGGGCGTGGATCCCGA CATGGATCCGCTCAGCCGTGGACAGACCGTGGCGGAACTGGTGGCCGGCTGCCTGGAGTACGGCACGCAGCACGGCATCG ATCAGATGCTCGCGGTGATGAGCGAGGCGCACGCGCGCAAGATCGTCACGGGCATGGGCTGGTCCTATGAGCGCTGCGGC CCCCTGCGCCTGATGGGCGGCGTCCACGTCATGGCCGTACGACTGCGGCTCGACGACACGGCCCTGCAATCCGTTCTCCG CCGCACGCGGACGCAGGCAGGCCTTCTCCACGAAAACGCTTCGCCCCTCCAAAGCGCTCCGTGCGCGCAGTTCTGA
Upstream 100 bases:
>100_bases TAGGCATTTTCTTCGGTTCTGCAAGCTGTGCGTCTGAGTAGGTGGCACGGCCCCCCGCCCTTCCTACCATGCAGTCATCC CGAGAGAAGAGGAGGACTAC
Downstream 100 bases:
>100_bases AAGGAAAGACCATGATCCATCTCAGTACCGACCTCCCAATGCAAGCCTTGCGCCGGCGGCTCTCGGCGATCGGCATGCCG CTGGACGAATTGACGGCGGC
Product: autoinducer synthesis protein
Products: NA
Alternate protein names: Autoinducer synthesis protein solI [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MIETLTGIIPGSPGAEALYRFRHRVFVEHAGWELPCYGPLEFDEFDTPQAVYLVRRHAESRIAGMLRLLPTTQPYMIQSL WPELMGSHPIPSSPRVWEATRMGVDPDMDPLSRGQTVAELVAGCLEYGTQHGIDQMLAVMSEAHARKIVTGMGWSYERCG PLRLMGGVHVMAVRLRLDDTALQSVLRRTRTQAGLLHENASPLQSAPCAQF
Sequences:
>Translated_211_residues MIETLTGIIPGSPGAEALYRFRHRVFVEHAGWELPCYGPLEFDEFDTPQAVYLVRRHAESRIAGMLRLLPTTQPYMIQSL WPELMGSHPIPSSPRVWEATRMGVDPDMDPLSRGQTVAELVAGCLEYGTQHGIDQMLAVMSEAHARKIVTGMGWSYERCG PLRLMGGVHVMAVRLRLDDTALQSVLRRTRTQAGLLHENASPLQSAPCAQF >Mature_211_residues MIETLTGIIPGSPGAEALYRFRHRVFVEHAGWELPCYGPLEFDEFDTPQAVYLVRRHAESRIAGMLRLLPTTQPYMIQSL WPELMGSHPIPSSPRVWEATRMGVDPDMDPLSRGQTVAELVAGCLEYGTQHGIDQMLAVMSEAHARKIVTGMGWSYERCG PLRLMGGVHVMAVRLRLDDTALQSVLRRTRTQAGLLHENASPLQSAPCAQF
Specific function: Required for the synthesis of acyl-HSL autoinducers that bind to solR [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 23508; Mature: 23508
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETLTGIIPGSPGAEALYRFRHRVFVEHAGWELPCYGPLEFDEFDTPQAVYLVRRHAES CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RIAGMLRLLPTTQPYMIQSLWPELMGSHPIPSSPRVWEATRMGVDPDMDPLSRGQTVAEL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHH VAGCLEYGTQHGIDQMLAVMSEAHARKIVTGMGWSYERCGPLRLMGGVHVMAVRLRLDDT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEHEEECCCHH ALQSVLRRTRTQAGLLHENASPLQSAPCAQF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIETLTGIIPGSPGAEALYRFRHRVFVEHAGWELPCYGPLEFDEFDTPQAVYLVRRHAES CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RIAGMLRLLPTTQPYMIQSLWPELMGSHPIPSSPRVWEATRMGVDPDMDPLSRGQTVAEL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCHHHHHH VAGCLEYGTQHGIDQMLAVMSEAHARKIVTGMGWSYERCGPLRLMGGVHVMAVRLRLDDT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEHEEECCCHH ALQSVLRRTRTQAGLLHENASPLQSAPCAQF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]