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The map label for this gene is ugpA [H]

Identifier: 120612296

GI number: 120612296

Start: 4027867

End: 4028772

Strand: Direct

Name: ugpA [H]

Synonym: Aave_3651

Alternate gene names: 120612296

Gene position: 4027867-4028772 (Clockwise)

Preceding gene: 120612295

Following gene: 120612297

Centisome position: 75.25

GC content: 64.13

Gene sequence:

>906_bases
ATGCCCAGGGCCCCGCGCATCCCCATGGAAAAACGCGTCCGATTCCAATCCGCCTGGCTGCCCTGGCTGCTCATAGCCCC
GCAGATGGCCATCATCCTCGTCTTCTTCTTCTGGCCGGCCAGCCAGGCGCTCGTGCAGTCGATGCAGATGCAGGATGCCT
TCGGCACGTCCACCGAGTGGGTGGGGCTCGAGAACTTCCAGCGCCTGTTCGACGACCCCGGCTACATCGAATCGTTCAAG
ACGACGGCGCTGTTCTCGGTGCTCGTGGCCGGCTCAGGGATAGTGCTGTCGCTGCTGCTGGCGGTGTTCGCCGACCGCAT
CGTGCGCGGCGCGATGTTCTACAAGACCATGCTGATCCTGCCCTACGCCGTGGCGCCTGCCGTGGCCGCCGTGCTGTGGG
TGTTCATGTTCTCGCCGTCGCTCGGCGTGGTGTCGTATGCGCTGGGCAAGCTCGGAATCGACTGGAACCACCTGCTGAAC
TCCGGCCAGGCCATGGCGCTGATCGTGATGGCCTCGGTCTGGAAACAGATCTCCTACAACTTCCTCTTCTTCCTGGCCGG
CCTGCAGTCCATCCCCAGATCGCTGATCGAGGCCGCCGCCATCGACGGCGCCGGCCCTTGGCGACGGTTCTGGAGCGTGC
AGTTCCCGCTGCTCTCGCCCACGACCTTCTTCCTGCTGGTCATCAACGTGGTCTATGCGTTCTTCGACACCTTCGCCATC
GTCGATGCCGCCACGCAGGGCGGCCCCGGCAAGGACACGGCCATCCTGGTCTACAAGGTGTACTACGACGGCTTCAAGGC
CATGGACCTGGGCGGCTCGGCCGCGCAGTCGGTGGTGCTGATGCTCATCGTGGTGGCGCTCACCGTCGTGCAGTTCCGCT
ACGTCGAGAAGAAGGTCCAATACTGA

Upstream 100 bases:

>100_bases
ATCCGCCACGCGGGCCGGCCCGGCCGCCCCATCCGGCCCTCCCCGCCGAGCGGGGAGGGTTTTTTCGTCATCCCCCCCTG
CGGCACGCACCTGAGGGCGC

Downstream 100 bases:

>100_bases
GATGGTAGAACGCAGCCTCACGCGCGGCATGCTCGCGCACTTCATCATGGTCCTGGGGGTCGCCATCGTGGCGTTCCCGC
TCTACCTCGCCTTCGTGGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPRAPRIPMEKRVRFQSAWLPWLLIAPQMAIILVFFFWPASQALVQSMQMQDAFGTSTEWVGLENFQRLFDDPGYIESFK
TTALFSVLVAGSGIVLSLLLAVFADRIVRGAMFYKTMLILPYAVAPAVAAVLWVFMFSPSLGVVSYALGKLGIDWNHLLN
SGQAMALIVMASVWKQISYNFLFFLAGLQSIPRSLIEAAAIDGAGPWRRFWSVQFPLLSPTTFFLLVINVVYAFFDTFAI
VDAATQGGPGKDTAILVYKVYYDGFKAMDLGGSAAQSVVLMLIVVALTVVQFRYVEKKVQY

Sequences:

>Translated_301_residues
MPRAPRIPMEKRVRFQSAWLPWLLIAPQMAIILVFFFWPASQALVQSMQMQDAFGTSTEWVGLENFQRLFDDPGYIESFK
TTALFSVLVAGSGIVLSLLLAVFADRIVRGAMFYKTMLILPYAVAPAVAAVLWVFMFSPSLGVVSYALGKLGIDWNHLLN
SGQAMALIVMASVWKQISYNFLFFLAGLQSIPRSLIEAAAIDGAGPWRRFWSVQFPLLSPTTFFLLVINVVYAFFDTFAI
VDAATQGGPGKDTAILVYKVYYDGFKAMDLGGSAAQSVVLMLIVVALTVVQFRYVEKKVQY
>Mature_300_residues
PRAPRIPMEKRVRFQSAWLPWLLIAPQMAIILVFFFWPASQALVQSMQMQDAFGTSTEWVGLENFQRLFDDPGYIESFKT
TALFSVLVAGSGIVLSLLLAVFADRIVRGAMFYKTMLILPYAVAPAVAAVLWVFMFSPSLGVVSYALGKLGIDWNHLLNS
GQAMALIVMASVWKQISYNFLFFLAGLQSIPRSLIEAAAIDGAGPWRRFWSVQFPLLSPTTFFLLVINVVYAFFDTFAIV
DAATQGGPGKDTAILVYKVYYDGFKAMDLGGSAAQSVVLMLIVVALTVVQFRYVEKKVQY

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=60.958904109589, Blast_Score=351, Evalue=3e-98,
Organism=Escherichia coli, GI1787570, Length=269, Percent_Identity=31.9702602230483, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=28.4046692607004, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33465; Mature: 33334

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAPRIPMEKRVRFQSAWLPWLLIAPQMAIILVFFFWPASQALVQSMQMQDAFGTSTEW
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
VGLENFQRLFDDPGYIESFKTTALFSVLVAGSGIVLSLLLAVFADRIVRGAMFYKTMLIL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYAVAPAVAAVLWVFMFSPSLGVVSYALGKLGIDWNHLLNSGQAMALIVMASVWKQISYN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
FLFFLAGLQSIPRSLIEAAAIDGAGPWRRFWSVQFPLLSPTTFFLLVINVVYAFFDTFAI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VDAATQGGPGKDTAILVYKVYYDGFKAMDLGGSAAQSVVLMLIVVALTVVQFRYVEKKVQ
HHHHCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Y
C
>Mature Secondary Structure 
PRAPRIPMEKRVRFQSAWLPWLLIAPQMAIILVFFFWPASQALVQSMQMQDAFGTSTEW
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
VGLENFQRLFDDPGYIESFKTTALFSVLVAGSGIVLSLLLAVFADRIVRGAMFYKTMLIL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYAVAPAVAAVLWVFMFSPSLGVVSYALGKLGIDWNHLLNSGQAMALIVMASVWKQISYN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
FLFFLAGLQSIPRSLIEAAAIDGAGPWRRFWSVQFPLLSPTTFFLLVINVVYAFFDTFAI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VDAATQGGPGKDTAILVYKVYYDGFKAMDLGGSAAQSVVLMLIVVALTVVQFRYVEKKVQ
HHHHCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA