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The map label for this gene is ugpB [H]

Identifier: 120612295

GI number: 120612295

Start: 4026457

End: 4027767

Strand: Direct

Name: ugpB [H]

Synonym: Aave_3650

Alternate gene names: 120612295

Gene position: 4026457-4027767 (Clockwise)

Preceding gene: 120612291

Following gene: 120612296

Centisome position: 75.22

GC content: 65.37

Gene sequence:

>1311_bases
ATGCAGCCCAAGCACCTGGCCCTGGCCGCCGCCATCGCCGCATCCGCTTGCATTTCGGCCCACGCGCAGACCGAGATCCA
GTGGTGGCACTCGATGACGGCCGTGAACGGCGAATGGGTGAACGACCTGGCCCGCCAGTTCAACGAGAGCCAGAAGGACT
ACAAGGTCGTGCCCACCTACAAGGGCACCTATGACGAATCGATGACGGCCTCGATCGCCGCCTTCCGCGCCGGCAACGCG
CCGCACATCCTGCAGGTATTCGAAGTGGGCACCGCCACCATGATGGCCAGCAAGGGCGCGATCGTGCCCGTGGGCAAGGT
GATGCAGGATGCCGGCGCGCCGTTCGACCCCAAGGCCTACATCCCCGCCGTGGCCGGCTACTACACGGCCCCCAACGGTC
AGATGCTGAGCTTCCCGTTCAACAGCTCCACCACCATCTTCTACTTCAACAAGGACGCCTTCAAGGCCGCCGGCCTGCCC
ACCGACAAGGCGCCGGCCACCTGGCCCGAAGTGGTCAATGCCGCCGCCAAGCTCAAGGCCTCCGGCCACAAGTGCCCGTT
CACCACGGCCTGGCAGAACTGGACGCAGGTGGAAAGCTTCTCGGCCTGGCACAACGTGGAGTTCGCGAGCAAGGCCAACG
GCCTGCAGGGCCTCGACGCCCGCCTGAAGGTCGATTCGCCCCTGCACGTGCGCCACATCGAGAACCTCGCCAACATGGCC
AAGCAGGGCCTGTTCGTGTACAAAGGCCGCGGCAACGTGCCCGAGGCGAGCTTCGTCTCCGGCGAGTGCGCGATGATCAA
CACGTCGTCGGGCTTCTACGGCAACGTGGCCAAGAACGCCAAGTTCGCCTACGGCCTCGCCCCCCTGCCCTACTACCCGG
ACGTTCCCGGCGCCCCGCAGAACACCGTCATCGGCGGCGCAAGCCTCTGGGTGATGGCCGGCAAGAAGCCCGCCGAGTAC
AAGGGCGTGGCCGAATTCTTCAAGTTCATCTCGACGCCTGAAGTGCAGTCGGCCAGCCACAAGCGCACCGGCTACCTGCC
CGTGACGACCGCCGCCTACGAGCTGACCGAGAAGTCGGGCTTCTACAAGGAGCACCCCGGCACCGACGTCGCCGTGACGC
AGATGATCCGCAAGGTGACCGACAAGAGCCGCGGCATCCGCCTGGGCAACTATGTGCAGATCCGCGCGATCGAGGACGAA
GAGCTCGAACAGGTCTGGTCCGGCAAGAAGACCGCCAAGGAGGCACTCGACGCCATCGTGAAGCGCGGCAACGAACAGCT
GGAGCGCTTCCAGAAGGCCAACAAGGGCTGA

Upstream 100 bases:

>100_bases
TCCTGATCCGTGGAAAACCCTGTCTATGCGACAACGACATACCGATGACATGTAGCGCGCATACCATGCGCCGCTTTCAT
CGCTACTTTGAGGAGTTTCC

Downstream 100 bases:

>100_bases
TCCGCCACGCGGGCCGGCCCGGCCGCCCCATCCGGCCCTCCCCGCCGAGCGGGGAGGGTTTTTTCGTCATCCCCCCCTGC
GGCACGCACCTGAGGGCGCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MQPKHLALAAAIAASACISAHAQTEIQWWHSMTAVNGEWVNDLARQFNESQKDYKVVPTYKGTYDESMTASIAAFRAGNA
PHILQVFEVGTATMMASKGAIVPVGKVMQDAGAPFDPKAYIPAVAGYYTAPNGQMLSFPFNSSTTIFYFNKDAFKAAGLP
TDKAPATWPEVVNAAAKLKASGHKCPFTTAWQNWTQVESFSAWHNVEFASKANGLQGLDARLKVDSPLHVRHIENLANMA
KQGLFVYKGRGNVPEASFVSGECAMINTSSGFYGNVAKNAKFAYGLAPLPYYPDVPGAPQNTVIGGASLWVMAGKKPAEY
KGVAEFFKFISTPEVQSASHKRTGYLPVTTAAYELTEKSGFYKEHPGTDVAVTQMIRKVTDKSRGIRLGNYVQIRAIEDE
ELEQVWSGKKTAKEALDAIVKRGNEQLERFQKANKG

Sequences:

>Translated_436_residues
MQPKHLALAAAIAASACISAHAQTEIQWWHSMTAVNGEWVNDLARQFNESQKDYKVVPTYKGTYDESMTASIAAFRAGNA
PHILQVFEVGTATMMASKGAIVPVGKVMQDAGAPFDPKAYIPAVAGYYTAPNGQMLSFPFNSSTTIFYFNKDAFKAAGLP
TDKAPATWPEVVNAAAKLKASGHKCPFTTAWQNWTQVESFSAWHNVEFASKANGLQGLDARLKVDSPLHVRHIENLANMA
KQGLFVYKGRGNVPEASFVSGECAMINTSSGFYGNVAKNAKFAYGLAPLPYYPDVPGAPQNTVIGGASLWVMAGKKPAEY
KGVAEFFKFISTPEVQSASHKRTGYLPVTTAAYELTEKSGFYKEHPGTDVAVTQMIRKVTDKSRGIRLGNYVQIRAIEDE
ELEQVWSGKKTAKEALDAIVKRGNEQLERFQKANKG
>Mature_436_residues
MQPKHLALAAAIAASACISAHAQTEIQWWHSMTAVNGEWVNDLARQFNESQKDYKVVPTYKGTYDESMTASIAAFRAGNA
PHILQVFEVGTATMMASKGAIVPVGKVMQDAGAPFDPKAYIPAVAGYYTAPNGQMLSFPFNSSTTIFYFNKDAFKAAGLP
TDKAPATWPEVVNAAAKLKASGHKCPFTTAWQNWTQVESFSAWHNVEFASKANGLQGLDARLKVDSPLHVRHIENLANMA
KQGLFVYKGRGNVPEASFVSGECAMINTSSGFYGNVAKNAKFAYGLAPLPYYPDVPGAPQNTVIGGASLWVMAGKKPAEY
KGVAEFFKFISTPEVQSASHKRTGYLPVTTAAYELTEKSGFYKEHPGTDVAVTQMIRKVTDKSRGIRLGNYVQIRAIEDE
ELEQVWSGKKTAKEALDAIVKRGNEQLERFQKANKG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=438, Percent_Identity=51.3698630136986, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47483; Mature: 47483

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKHLALAAAIAASACISAHAQTEIQWWHSMTAVNGEWVNDLARQFNESQKDYKVVPTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCC
KGTYDESMTASIAAFRAGNAPHILQVFEVGTATMMASKGAIVPVGKVMQDAGAPFDPKAY
CCCCCCHHHHHHHHHHCCCCCCEEEEEHHCHHHHHCCCCCEEEHHHHHHHCCCCCCCCCC
IPAVAGYYTAPNGQMLSFPFNSSTTIFYFNKDAFKAAGLPTDKAPATWPEVVNAAAKLKA
CCHHHCEEECCCCCEEEECCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHC
SGHKCPFTTAWQNWTQVESFSAWHNVEFASKANGLQGLDARLKVDSPLHVRHIENLANMA
CCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH
KQGLFVYKGRGNVPEASFVSGECAMINTSSGFYGNVAKNAKFAYGLAPLPYYPDVPGAPQ
HCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
NTVIGGASLWVMAGKKPAEYKGVAEFFKFISTPEVQSASHKRTGYLPVTTAAYELTEKSG
CCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCC
FYKEHPGTDVAVTQMIRKVTDKSRGIRLGNYVQIRAIEDEELEQVWSGKKTAKEALDAIV
CCCCCCCCHHHHHHHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHH
KRGNEQLERFQKANKG
HCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQPKHLALAAAIAASACISAHAQTEIQWWHSMTAVNGEWVNDLARQFNESQKDYKVVPTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCC
KGTYDESMTASIAAFRAGNAPHILQVFEVGTATMMASKGAIVPVGKVMQDAGAPFDPKAY
CCCCCCHHHHHHHHHHCCCCCCEEEEEHHCHHHHHCCCCCEEEHHHHHHHCCCCCCCCCC
IPAVAGYYTAPNGQMLSFPFNSSTTIFYFNKDAFKAAGLPTDKAPATWPEVVNAAAKLKA
CCHHHCEEECCCCCEEEECCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHC
SGHKCPFTTAWQNWTQVESFSAWHNVEFASKANGLQGLDARLKVDSPLHVRHIENLANMA
CCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH
KQGLFVYKGRGNVPEASFVSGECAMINTSSGFYGNVAKNAKFAYGLAPLPYYPDVPGAPQ
HCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
NTVIGGASLWVMAGKKPAEYKGVAEFFKFISTPEVQSASHKRTGYLPVTTAAYELTEKSG
CCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCC
FYKEHPGTDVAVTQMIRKVTDKSRGIRLGNYVQIRAIEDEELEQVWSGKKTAKEALDAIV
CCCCCCCCHHHHHHHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHH
KRGNEQLERFQKANKG
HCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA