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The map label for this gene is ugpE [H]

Identifier: 120612297

GI number: 120612297

Start: 4028774

End: 4029625

Strand: Direct

Name: ugpE [H]

Synonym: Aave_3652

Alternate gene names: 120612297

Gene position: 4028774-4029625 (Clockwise)

Preceding gene: 120612296

Following gene: 120612298

Centisome position: 75.27

GC content: 65.49

Gene sequence:

>852_bases
ATGGTAGAACGCAGCCTCACGCGCGGCATGCTCGCGCACTTCATCATGGTCCTGGGGGTCGCCATCGTGGCGTTCCCGCT
CTACCTCGCCTTCGTGGCGTCCACCCACACCGCCCAGGAGATCGTGCAGGCGCCCATGCCGCTGCTGCCGGGGGGCCACT
TCTGGGAAACCTACTCCGCCGCGCTCTTCGGACGCGACCAGGGCGCGGGCTCCACCGCCCCCGTGGCGCGCATGATGTGG
GTGAGCCTGGTGTCGGCGCTGGTCATCACGTTCGGCAAGATCGCCATCTCGCTGATGTCGGCCTTCGCCATCGTGTACTT
CCGCTTCCCGTTCAAGGGCCTGTGCTTCTGGCTGATCTTCGTCACGCTGATGCTGCCGGTGGAAGTGCGCATCGGACCGA
CCTACCAGGTGGTGTCCGACCTCGGCATGCTCAACAGCTACGCGGGCCTCACGGTGCCGCTGATCGCGTCGGCCACCGCC
ACGTTCCTGTTCCGGCAGTTCTTCCTGACGGTGCCGGACGAACTGGTCGAGGCCGCGCGCATCGACGGCGCCGGGCCCAT
GCGCTTCTTCAAGGACGTGCTGGTGCCCCTGTCGCGCACCTCCATCGCCGCCCTCTTCGTGATCCAGTTCATCTACGGAT
GGAACCAGTACCTCTGGCCACTGCTGGCGACCACGAGCGAGGACATGTACCCCGTGGTGATCGGCATCAAGCGCATGATC
GCGGGCGGCGACGGCCAGAACGAATGGAACATCGTCATGGCCACCGCCATCCTGGCCATGCTGCCGCCCGCCGTGGTGGT
GATCCTCATGCAGAAATGGTTCGTGAAGGGCCTGGTGGATACCGAGAAGTAG

Upstream 100 bases:

>100_bases
CTGGGCGGCTCGGCCGCGCAGTCGGTGGTGCTGATGCTCATCGTGGTGGCGCTCACCGTCGTGCAGTTCCGCTACGTCGA
GAAGAAGGTCCAATACTGAG

Downstream 100 bases:

>100_bases
TCCGCCCCCGTCCCCCCGGCCCCATTCCACCCACGCATACAGCTACGCACCCAATCGCAAAATGGCATCTCTTTCCCTGC
GCAACGTCGTCAAGCGCTAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVERSLTRGMLAHFIMVLGVAIVAFPLYLAFVASTHTAQEIVQAPMPLLPGGHFWETYSAALFGRDQGAGSTAPVARMMW
VSLVSALVITFGKIAISLMSAFAIVYFRFPFKGLCFWLIFVTLMLPVEVRIGPTYQVVSDLGMLNSYAGLTVPLIASATA
TFLFRQFFLTVPDELVEAARIDGAGPMRFFKDVLVPLSRTSIAALFVIQFIYGWNQYLWPLLATTSEDMYPVVIGIKRMI
AGGDGQNEWNIVMATAILAMLPPAVVVILMQKWFVKGLVDTEK

Sequences:

>Translated_283_residues
MVERSLTRGMLAHFIMVLGVAIVAFPLYLAFVASTHTAQEIVQAPMPLLPGGHFWETYSAALFGRDQGAGSTAPVARMMW
VSLVSALVITFGKIAISLMSAFAIVYFRFPFKGLCFWLIFVTLMLPVEVRIGPTYQVVSDLGMLNSYAGLTVPLIASATA
TFLFRQFFLTVPDELVEAARIDGAGPMRFFKDVLVPLSRTSIAALFVIQFIYGWNQYLWPLLATTSEDMYPVVIGIKRMI
AGGDGQNEWNIVMATAILAMLPPAVVVILMQKWFVKGLVDTEK
>Mature_283_residues
MVERSLTRGMLAHFIMVLGVAIVAFPLYLAFVASTHTAQEIVQAPMPLLPGGHFWETYSAALFGRDQGAGSTAPVARMMW
VSLVSALVITFGKIAISLMSAFAIVYFRFPFKGLCFWLIFVTLMLPVEVRIGPTYQVVSDLGMLNSYAGLTVPLIASATA
TFLFRQFFLTVPDELVEAARIDGAGPMRFFKDVLVPLSRTSIAALFVIQFIYGWNQYLWPLLATTSEDMYPVVIGIKRMI
AGGDGQNEWNIVMATAILAMLPPAVVVILMQKWFVKGLVDTEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=284, Percent_Identity=58.0985915492958, Blast_Score=330, Evalue=5e-92,
Organism=Escherichia coli, GI1790464, Length=284, Percent_Identity=27.112676056338, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787571, Length=185, Percent_Identity=23.2432432432432, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31203; Mature: 31203

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]