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The map label for this gene is 120612285

Identifier: 120612285

GI number: 120612285

Start: 4012593

End: 4012910

Strand: Reverse

Name: 120612285

Synonym: Aave_3639

Alternate gene names: NA

Gene position: 4012910-4012593 (Counterclockwise)

Preceding gene: 120612286

Following gene: 120612284

Centisome position: 74.97

GC content: 73.58

Gene sequence:

>318_bases
ATGCCTATCTATGCCTATAAATGCGGCTCCTGTGGCCATGCCAAGGATGTGCTGCAGAAGATCTCCGATGCCCCGCTCAC
GGTCTGCCCCGCCTGTGGCGCCGAGACGTTCTCCAAGCAGGTCACGGCCGCCGGCTTCCAGCTCAAGGGCTCGGGCTGGT
ACGTGACCGATTTCCGCGGCGGCAACGGCGGCGGCGCCCGCGCCCCGGCTCCGGCCGCGGAAGGCGCCGCGGCGCCCGCG
CCTGCCCCCGCGGCGGCACCCGCACCGGCACCGGCTGCTCCCGCCGCGGCGCCCGCCGCCCCCACCTCCAAGAGCTGA

Upstream 100 bases:

>100_bases
CGCGGGCCGCGAAATGAGGGCTGGCAGGGGTGCCGGAGCGCCTGCCTATAATTGAAGGTTTTGCAAACCCTCCTTCGCGC
CTTGAATAGCACGGTAAAAA

Downstream 100 bases:

>100_bases
ACGTCCTCGATGTCCGCTTTGCGCAAATGGCTGTTCACGGGCCTGCTGGTGATCGTTCCGGGCGTGATCACCGCCTGGGT
CCTGCACTGGATCATCAGCA

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator; FmdB Family Protein

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPIYAYKCGSCGHAKDVLQKISDAPLTVCPACGAETFSKQVTAAGFQLKGSGWYVTDFRGGNGGGARAPAPAAEGAAAPA
PAPAAAPAPAPAAPAAAPAAPTSKS

Sequences:

>Translated_105_residues
MPIYAYKCGSCGHAKDVLQKISDAPLTVCPACGAETFSKQVTAAGFQLKGSGWYVTDFRGGNGGGARAPAPAAEGAAAPA
PAPAAAPAPAPAAPAAAPAAPTSKS
>Mature_104_residues
PIYAYKCGSCGHAKDVLQKISDAPLTVCPACGAETFSKQVTAAGFQLKGSGWYVTDFRGGNGGGARAPAPAAEGAAAPAP
APAAAPAPAPAAPAAAPAAPTSKS

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10095; Mature: 9964

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYAYKCGSCGHAKDVLQKISDAPLTVCPACGAETFSKQVTAAGFQLKGSGWYVTDFRG
CCEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCEEECCCCEEEEECCC
GNGGGARAPAPAAEGAAAPAPAPAAAPAPAPAAPAAAPAAPTSKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYAYKCGSCGHAKDVLQKISDAPLTVCPACGAETFSKQVTAAGFQLKGSGWYVTDFRG
CEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCEEECCCCEEEEECCC
GNGGGARAPAPAAEGAAAPAPAPAAAPAPAPAAPAAAPAAPTSKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA