Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612284
Identifier: 120612284
GI number: 120612284
Start: 4011963
End: 4012583
Strand: Reverse
Name: 120612284
Synonym: Aave_3638
Alternate gene names: NA
Gene position: 4012583-4011963 (Counterclockwise)
Preceding gene: 120612285
Following gene: 120612283
Centisome position: 74.96
GC content: 66.18
Gene sequence:
>621_bases ATGTCCGCTTTGCGCAAATGGCTGTTCACGGGCCTGCTGGTGATCGTTCCGGGCGTGATCACCGCCTGGGTCCTGCACTG GATCATCAGCACGCTCGACCAGACCCTGCAGATCCTGCCGGAGAACTGGCAGCCCGACCGGCTGCTGGGCTTCCACATCC CCGGCTTCGGGGTGCTGCTCACGTTCGCGATCCTGCTCACCGTGGGCGCGCTGGCGAGCAACTTCGCCGGCCGCAAGCTG GTGGAGTGGGGCGACCGGCTCGTGAGCCGCATCCCCGTGGTGCGCTCGATCTATTCGAGCGTCAAGCAGGTCTCGGACAC GCTGTTCTCCGAAAGCGGCAACGCCTTCCGCACGGCGGTGCTCGTGCAGTGGCCGCGCGAGGGCGTCTGGACCGTCGCCT TCATCACGGGCGCGCCGAGCGGCGAAGTGGCCGCCTACCTGCGTGACGGCTACGTCAGCGTGTACGTGCCGACGACGCCC AATCCCACCGGTGGCTATTTCGTGATCCTGCGCAAGAGCGACTGCATCGAGCTCGACATGAGCGTGGACGCCGCGCTGAA GTACATCGTGTCGATGGGCGTGGTGGCTCCCCCGGACCTCACGCTCACCGATTCCAAGTAA
Upstream 100 bases:
>100_bases CGCGGCGCCCGCGCCTGCCCCCGCGGCGGCACCCGCACCGGCACCGGCTGCTCCCGCCGCGGCGCCCGCCGCCCCCACCT CCAAGAGCTGAACGTCCTCG
Downstream 100 bases:
>100_bases CCCTTTCCCTTCGGCGCGCCCCGCGCGGGCGCCTGATACCTCCCTCCAGTTTGGGCGCCCCCCGCGGGCGCAGGAAGAAG CACCCATGGCCATGCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSALRKWLFTGLLVIVPGVITAWVLHWIISTLDQTLQILPENWQPDRLLGFHIPGFGVLLTFAILLTVGALASNFAGRKL VEWGDRLVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAVLVQWPREGVWTVAFITGAPSGEVAAYLRDGYVSVYVPTTP NPTGGYFVILRKSDCIELDMSVDAALKYIVSMGVVAPPDLTLTDSK
Sequences:
>Translated_206_residues MSALRKWLFTGLLVIVPGVITAWVLHWIISTLDQTLQILPENWQPDRLLGFHIPGFGVLLTFAILLTVGALASNFAGRKL VEWGDRLVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAVLVQWPREGVWTVAFITGAPSGEVAAYLRDGYVSVYVPTTP NPTGGYFVILRKSDCIELDMSVDAALKYIVSMGVVAPPDLTLTDSK >Mature_205_residues SALRKWLFTGLLVIVPGVITAWVLHWIISTLDQTLQILPENWQPDRLLGFHIPGFGVLLTFAILLTVGALASNFAGRKLV EWGDRLVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAVLVQWPREGVWTVAFITGAPSGEVAAYLRDGYVSVYVPTTPN PTGGYFVILRKSDCIELDMSVDAALKYIVSMGVVAPPDLTLTDSK
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22583; Mature: 22451
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRKWLFTGLLVIVPGVITAWVLHWIISTLDQTLQILPENWQPDRLLGFHIPGFGVLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH TFAILLTVGALASNFAGRKLVEWGDRLVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LVQWPREGVWTVAFITGAPSGEVAAYLRDGYVSVYVPTTPNPTGGYFVILRKSDCIELDM EEECCCCCEEEEEEEECCCCCHHHHEEECCEEEEEECCCCCCCCCEEEEEECCCCEEECC SVDAALKYIVSMGVVAPPDLTLTDSK CHHHHHHHHHHHCCCCCCCEEECCCC >Mature Secondary Structure SALRKWLFTGLLVIVPGVITAWVLHWIISTLDQTLQILPENWQPDRLLGFHIPGFGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH TFAILLTVGALASNFAGRKLVEWGDRLVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LVQWPREGVWTVAFITGAPSGEVAAYLRDGYVSVYVPTTPNPTGGYFVILRKSDCIELDM EEECCCCCEEEEEEEECCCCCHHHHEEECCEEEEEECCCCCCCCCEEEEEECCCCEEECC SVDAALKYIVSMGVVAPPDLTLTDSK CHHHHHHHHHHHCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA