Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612282
Identifier: 120612282
GI number: 120612282
Start: 4009172
End: 4009984
Strand: Reverse
Name: 120612282
Synonym: Aave_3636
Alternate gene names: NA
Gene position: 4009984-4009172 (Counterclockwise)
Preceding gene: 120612283
Following gene: 120612281
Centisome position: 74.91
GC content: 72.57
Gene sequence:
>813_bases ATGCGGACTTTCGCGAAGGGCGCCGCGGCCCTGGCGGCGGTGCTGGCCCTGGCGGCCTGCGGCGAGAAGAAGACGGAACT GGGCGAGGGCGGTTCGGTGGTGAGCGGTTCGGCCGGCCCCCAGGGCGCGCGCAACGCCGCGCACGAACTGGTGCGCTGCG ACGCACCGGTCGCCACGCTGGCGCTGGCCGAGAACCCGAACGGCTACGTGATGGGCTCGGCCTACCAGCTGCCGGCGTCG CCCGTGCCGCTGGTCAAGCTGCTCGCCCAGCAGAGCGGATGTTTCCGCGTGGTGGACCGGTCGGCTGGCCTGCGCGGCAC GGTACAGGAGCAGGAACTGCGCGAGGCCGGTGTTCTGCGCAAGGACACCACGGTGCACAAGGGCCGGGGCTACGAGGCGC AATTCACCCTGACGCCGAGCGTCACCTTCAGCGAGCAGGATGCCGGGAGGGGCCTGGGCGGCATCCTCGCGATGATCCCC GGGCTGCGCGACATGGCCGGCCTCATCGGCCTTGCGGAGCAGGTGAAGTTCAAGGAGGCCCAGACGGCGCTGCTGCTGTC GGACAACGAGACCACGGAGCAGGTGGCCGCCGCCACGGGCGCTGCCCGTACCACGGACCTGGGCGTGGGCGGCCTGGTGC TGGGCCGCCTGGGCGGCGGCGCCGGGGCCGGCTGGAGCAACACCAACGAGGGCAAGGTGATCGCCGCGGCGTTCCTCGAC GCGCACAACCAGCTCGTGGCGCAGGTGCGCGCGCTGCAGGCGAAGGAGTTGCCTCCGGCGGTGCCGGTGCGCAAAACCGC GGCAGGCAGCTGA
Upstream 100 bases:
>100_bases GGACGCCGCCAAGGCCGCCTGACCGGAGGCCGGCAACGGTTGACCCGGCATGGCAGGGGCCTCGCGGCTTCTGCCATTTT TTTAGCGAGGAACCTGTCAC
Downstream 100 bases:
>100_bases ACGCCGGCTCAGGGTTGACGAGAGTCCGGCGGGTGCGATTTGCTTACAGTGGTTCGACCTTTCCATGGCATCGGGGAGCG GGTGTGTCCCGTGGTGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MRTFAKGAAALAAVLALAACGEKKTELGEGGSVVSGSAGPQGARNAAHELVRCDAPVATLALAENPNGYVMGSAYQLPAS PVPLVKLLAQQSGCFRVVDRSAGLRGTVQEQELREAGVLRKDTTVHKGRGYEAQFTLTPSVTFSEQDAGRGLGGILAMIP GLRDMAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGVGGLVLGRLGGGAGAGWSNTNEGKVIAAAFLD AHNQLVAQVRALQAKELPPAVPVRKTAAGS
Sequences:
>Translated_270_residues MRTFAKGAAALAAVLALAACGEKKTELGEGGSVVSGSAGPQGARNAAHELVRCDAPVATLALAENPNGYVMGSAYQLPAS PVPLVKLLAQQSGCFRVVDRSAGLRGTVQEQELREAGVLRKDTTVHKGRGYEAQFTLTPSVTFSEQDAGRGLGGILAMIP GLRDMAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGVGGLVLGRLGGGAGAGWSNTNEGKVIAAAFLD AHNQLVAQVRALQAKELPPAVPVRKTAAGS >Mature_270_residues MRTFAKGAAALAAVLALAACGEKKTELGEGGSVVSGSAGPQGARNAAHELVRCDAPVATLALAENPNGYVMGSAYQLPAS PVPLVKLLAQQSGCFRVVDRSAGLRGTVQEQELREAGVLRKDTTVHKGRGYEAQFTLTPSVTFSEQDAGRGLGGILAMIP GLRDMAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGVGGLVLGRLGGGAGAGWSNTNEGKVIAAAFLD AHNQLVAQVRALQAKELPPAVPVRKTAAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27494; Mature: 27494
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFAKGAAALAAVLALAACGEKKTELGEGGSVVSGSAGPQGARNAAHELVRCDAPVATL CCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEE ALAENPNGYVMGSAYQLPASPVPLVKLLAQQSGCFRVVDRSAGLRGTVQEQELREAGVLR EEEECCCCEEEECEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC KDTTVHKGRGYEAQFTLTPSVTFSEQDAGRGLGGILAMIPGLRDMAGLIGLAEQVKFKEA CCCEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QTALLLSDNETTEQVAAATGAARTTDLGVGGLVLGRLGGGAGAGWSNTNEGKVIAAAFLD CEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEHHHH AHNQLVAQVRALQAKELPPAVPVRKTAAGS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRTFAKGAAALAAVLALAACGEKKTELGEGGSVVSGSAGPQGARNAAHELVRCDAPVATL CCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEE ALAENPNGYVMGSAYQLPASPVPLVKLLAQQSGCFRVVDRSAGLRGTVQEQELREAGVLR EEEECCCCEEEECEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC KDTTVHKGRGYEAQFTLTPSVTFSEQDAGRGLGGILAMIPGLRDMAGLIGLAEQVKFKEA CCCEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QTALLLSDNETTEQVAAATGAARTTDLGVGGLVLGRLGGGAGAGWSNTNEGKVIAAAFLD CEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEHHHH AHNQLVAQVRALQAKELPPAVPVRKTAAGS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA