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The map label for this gene is ybhP [H]

Identifier: 120612279

GI number: 120612279

Start: 4005799

End: 4006557

Strand: Reverse

Name: ybhP [H]

Synonym: Aave_3633

Alternate gene names: 120612279

Gene position: 4006557-4005799 (Counterclockwise)

Preceding gene: 120612281

Following gene: 120612278

Centisome position: 74.85

GC content: 69.83

Gene sequence:

>759_bases
ATGGAACCATGGGACGTCTCCGACGGCACCGGCATTCTCCGGATTGCCACCTACAACATCCACAAGGGCGTGCAGGGCCT
GGGCCCCGCCCGGAGGCTCGAGATCCACAACCTCGGCCACGCGGTCGAGCAGCTGGACGCCGACATCGTCTGCCTTCAGG
AGGTGCGCAAGGTGCACCGGCGCGGTGCACGGCATTTCCCGCGCTGGCCCGAGCTGCCGCAGGCCGAATTCCTCGCCCCG
GAGGGCTACGAGGCGGTCTATCGCACCAATGCGTTCACGCGCCATGGCGAGCATGGCAATGCGCTGCTCACGCGCTGGCC
GGTGATCGGCCACCAGCACGAGGATATGTCGGACCATCGCTTCGAGCTGCGGGGGCTGCTGCATGTGGAGGTCGAGGTCC
AGGGCCGCCGCGTGCATGCCATCGTCGTCCACCTGGGCCTGATCCCGGGCAGCCGGGTGCGGCAGGTGGAGCAGCTGCAG
CGTTTCGTGGCGCGGGAGGTACCGCCCGGCGCGCCGCTGGTGGTCGCGGGGGATTTCAACGACTGGGGCCGGCAGGTCAA
GCACGCGCTGGCGGCGTTCGGCCTGCGCGAGTACGAAGGGGAGCCGCGCGCGCTGACCTATCCGGCCCGCCTGCCGCTGG
TGCAGCTGGACCACGTGTACGTGCGCGGTATGGAGCCCATGGGCCTGCACGTGCCGCGCGGCCGCATCTGGTGGCGCATG
TCGGACCACCTGCCGCTGATCGCGGAATTCCGGCTGTGA

Upstream 100 bases:

>100_bases
GAGGAAAAGGTGGAGAGGCGACGTGCCAGTGTAGGGCCTGGCGGCCGGGAACGGGAGAGGGAAAGCGCGGGAGGCCGGAA
GGCTGCGCCACAATCGCGCC

Downstream 100 bases:

>100_bases
CGCCGCAGGCCCCGCGTTCCGCTGCGCCGGCACCCGCGTCCGCGCCCGCACCGCGGCGCGGCGTGCCCCGCTTCACCCTG
CGCCGGCGCCGCGCGGCTCC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEPWDVSDGTGILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGARHFPRWPELPQAEFLAP
EGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQHEDMSDHRFELRGLLHVEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQ
RFVAREVPPGAPLVVAGDFNDWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQLDHVYVRGMEPMGLHVPRGRIWWRM
SDHLPLIAEFRL

Sequences:

>Translated_252_residues
MEPWDVSDGTGILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGARHFPRWPELPQAEFLAP
EGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQHEDMSDHRFELRGLLHVEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQ
RFVAREVPPGAPLVVAGDFNDWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQLDHVYVRGMEPMGLHVPRGRIWWRM
SDHLPLIAEFRL
>Mature_252_residues
MEPWDVSDGTGILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGARHFPRWPELPQAEFLAP
EGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQHEDMSDHRFELRGLLHVEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQ
RFVAREVPPGAPLVVAGDFNDWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQLDHVYVRGMEPMGLHVPRGRIWWRM
SDHLPLIAEFRL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=248, Percent_Identity=37.9032258064516, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28859; Mature: 28859

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPWDVSDGTGILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHR
CCCCCCCCCCCEEEEEEEEHHCCCCCCCCHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHH
RGARHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQHEDMSDHR
CCCCCCCCCCCCCCHHCCCCCCCHHHEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCC
FELRGLLHVEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQRFVAREVPPGAPLVVAGDFN
EEEEEEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
DWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQLDHVYVRGMEPMGLHVPRGRIWWRM
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECEEEEECCCCCCEECCCCEEEEEE
SDHLPLIAEFRL
CCCCCEEEEECC
>Mature Secondary Structure
MEPWDVSDGTGILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHR
CCCCCCCCCCCEEEEEEEEHHCCCCCCCCHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHH
RGARHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQHEDMSDHR
CCCCCCCCCCCCCCHHCCCCCCCHHHEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCC
FELRGLLHVEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQRFVAREVPPGAPLVVAGDFN
EEEEEEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
DWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQLDHVYVRGMEPMGLHVPRGRIWWRM
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECEEEEECCCCCCEECCCCEEEEEE
SDHLPLIAEFRL
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]