Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612223
Identifier: 120612223
GI number: 120612223
Start: 3948190
End: 3948525
Strand: Direct
Name: 120612223
Synonym: Aave_3576
Alternate gene names: NA
Gene position: 3948190-3948525 (Clockwise)
Preceding gene: 120612222
Following gene: 120612229
Centisome position: 73.76
GC content: 74.11
Gene sequence:
>336_bases ATGCGCACCACTGCCAGCCTTCTCGCCACCGCCGCCTTCGCACTCCTCGCCGGTGGCTGCAGCACGGCGAACATGCCGTG GGGCGGACAGCCCGCGCCCGCGCCGGTCGGCCCGACCGGCGCCCCCATGGGCGGCACCTGCAACGCCCAGCCGGCCCAGG CCCTGATCGGCCAGAACGGCACCGCGAGAGTGGTCGAGGATGCGCGCGTGCGGTCCGGGGCCCAACTGGCACGGCTGCTG CGCCCCGGGCAGATCGTCACCAAGGAATATGACCCGCAGCGCCTCAATCTCGAGGTGGACGCCTCCGGCCGCATCGTCGC GGCCCGCTGCGGCTGA
Upstream 100 bases:
>100_bases AGCCCCGTGTTACCGCTCGTGACGTTCCCGGGCAGCCCGCTGCGCTAAGGTCAGGCACCAGACACCCTGCCCACCTTTTC AGATGACGGAGCTTCCATCC
Downstream 100 bases:
>100_bases CCTGCCGGGCCGCAGCCCGCACCGCAACCCCGCTCAGTCCGCCAGGAATAGCTCCTGCAGGTCGCTGAGGAAATCGAACC CGCGCTCCGTGGGGCGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase Inhibitor
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MRTTASLLATAAFALLAGGCSTANMPWGGQPAPAPVGPTGAPMGGTCNAQPAQALIGQNGTARVVEDARVRSGAQLARLL RPGQIVTKEYDPQRLNLEVDASGRIVAARCG
Sequences:
>Translated_111_residues MRTTASLLATAAFALLAGGCSTANMPWGGQPAPAPVGPTGAPMGGTCNAQPAQALIGQNGTARVVEDARVRSGAQLARLL RPGQIVTKEYDPQRLNLEVDASGRIVAARCG >Mature_111_residues MRTTASLLATAAFALLAGGCSTANMPWGGQPAPAPVGPTGAPMGGTCNAQPAQALIGQNGTARVVEDARVRSGAQLARLL RPGQIVTKEYDPQRLNLEVDASGRIVAARCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11254; Mature: 11254
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTASLLATAAFALLAGGCSTANMPWGGQPAPAPVGPTGAPMGGTCNAQPAQALIGQNG CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC TARVVEDARVRSGAQLARLLRPGQIVTKEYDPQRLNLEVDASGRIVAARCG CEEEHHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCEEEEECC >Mature Secondary Structure MRTTASLLATAAFALLAGGCSTANMPWGGQPAPAPVGPTGAPMGGTCNAQPAQALIGQNG CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC TARVVEDARVRSGAQLARLLRPGQIVTKEYDPQRLNLEVDASGRIVAARCG CEEEHHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA