Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yicC [C]

Identifier: 120612229

GI number: 120612229

Start: 3953425

End: 3954336

Strand: Direct

Name: yicC [C]

Synonym: Aave_3582

Alternate gene names: 120612229

Gene position: 3953425-3954336 (Clockwise)

Preceding gene: 120612223

Following gene: 120612230

Centisome position: 73.86

GC content: 69.3

Gene sequence:

>912_bases
ATGGCAGTTTACAGCATGACCGGCTACGCGAGCGCCCAGCTCGAAGCCTCCGCCACCGATGCCGACAGCGGTGCCCGCCC
CGCGCGCCTGGGTATCGAGATCCGCTCCGTCAACAGCCGCTTCCTGGATCTCTCCTTCCGCCTGCCCGATGAACTCCGGG
CCCAGGAACCCGGCCTGCGCGCCCTCGTCACGCAGCATCTCAAGCGCGGCAAGGTGGAGGTGCGCGCCTCCATCGAATCG
GAGGCCCAGGGCCTCATCGCTCCGCCCTCCGCGCGCATGCTGCAGCAACTCAACTCGGCGCAGGATTCCGTCCGCGCCTG
GCTGCCGTCCGCCGCGCCACTGTCCGTGGCCGACGCGCTGCGCCTGTGCGCGGGTTCCGCGGCGTCCTCCGCGTCCTGGA
GCCCCGAGGGCATCCAGGCCCTCGCCCAGCGGGCACTGGAAGACCTGGTGGCGGCGCGCGAGCGCGAGGGCAAGCGGCTC
TCCGCCATGCTGCAGGACCGCCTGAAGCAACTGCGCGACCTGGCACGACAGGCCGCGCCCCTGGTGCCCCAGCTCGTGGA
CCAGCAGCGCCAGCGTTTCCTGGAGCGCTGGAAGGAAGCCATGGCGCTGACCGAAGGCGTGCCGGTGCCCGAAGCCGCAC
AGGACCGCGCCCTCGCGGAAGCCACCGCTTTCGCCATCCGCATCGACGTCGCGGAAGAGATCACGCGCCTCGACTCCCAC
CTCGACGAGATCGAGCGCCTGCTGAAGAAGGGCGGGGAGATCGGCAAGCGGCTGGACTTCCTCATCCAGGAACTGCACCG
CGAGGCCAATACCCTCGGCTCCAAGTCCGCCGCCATGGAACTGACCCGCATCAGCGTGGACATGAAAGTGCTCATCGAGC
AGATGCGCGAGCAGGTCCAGAACATCGAGTGA

Upstream 100 bases:

>100_bases
CTTGATTTTTGACATATTCGCGAAAAAACCTGGACGCGTCCCGATCGGGAAAAGGAACCCGGATAATCGCCGGATCGCAA
GCAATCACCGAAAAAGTCCG

Downstream 100 bases:

>100_bases
GCGATAATTCTCCTGTTTTGATAGCGGCCCGCGCACATCCCGTATGGACTATCCCGGAAATCTCTTCGTAGTGGCGGCGC
CGAGCGGCGCAGGCAAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MAVYSMTGYASAQLEASATDADSGARPARLGIEIRSVNSRFLDLSFRLPDELRAQEPGLRALVTQHLKRGKVEVRASIES
EAQGLIAPPSARMLQQLNSAQDSVRAWLPSAAPLSVADALRLCAGSAASSASWSPEGIQALAQRALEDLVAAREREGKRL
SAMLQDRLKQLRDLARQAAPLVPQLVDQQRQRFLERWKEAMALTEGVPVPEAAQDRALAEATAFAIRIDVAEEITRLDSH
LDEIERLLKKGGEIGKRLDFLIQELHREANTLGSKSAAMELTRISVDMKVLIEQMREQVQNIE

Sequences:

>Translated_303_residues
MAVYSMTGYASAQLEASATDADSGARPARLGIEIRSVNSRFLDLSFRLPDELRAQEPGLRALVTQHLKRGKVEVRASIES
EAQGLIAPPSARMLQQLNSAQDSVRAWLPSAAPLSVADALRLCAGSAASSASWSPEGIQALAQRALEDLVAAREREGKRL
SAMLQDRLKQLRDLARQAAPLVPQLVDQQRQRFLERWKEAMALTEGVPVPEAAQDRALAEATAFAIRIDVAEEITRLDSH
LDEIERLLKKGGEIGKRLDFLIQELHREANTLGSKSAAMELTRISVDMKVLIEQMREQVQNIE
>Mature_302_residues
AVYSMTGYASAQLEASATDADSGARPARLGIEIRSVNSRFLDLSFRLPDELRAQEPGLRALVTQHLKRGKVEVRASIESE
AQGLIAPPSARMLQQLNSAQDSVRAWLPSAAPLSVADALRLCAGSAASSASWSPEGIQALAQRALEDLVAAREREGKRLS
AMLQDRLKQLRDLARQAAPLVPQLVDQQRQRFLERWKEAMALTEGVPVPEAAQDRALAEATAFAIRIDVAEEITRLDSHL
DEIERLLKKGGEIGKRLDFLIQELHREANTLGSKSAAMELTRISVDMKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=305, Percent_Identity=35.0819672131148, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33362; Mature: 33230

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYSMTGYASAQLEASATDADSGARPARLGIEIRSVNSRFLDLSFRLPDELRAQEPGLR
CCEEECCCCCHHHCCCCCCCCCCCCCCHHHCEEEEECCCHHEEEEECCCHHHHCCCCCHH
ALVTQHLKRGKVEVRASIESEAQGLIAPPSARMLQQLNSAQDSVRAWLPSAAPLSVADAL
HHHHHHHHCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RLCAGSAASSASWSPEGIQALAQRALEDLVAAREREGKRLSAMLQDRLKQLRDLARQAAP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LVPQLVDQQRQRFLERWKEAMALTEGVPVPEAAQDRALAEATAFAIRIDVAEEITRLDSH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDEIERLLKKGGEIGKRLDFLIQELHREANTLGSKSAAMELTRISVDMKVLIEQMREQVQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NIE
CCC
>Mature Secondary Structure 
AVYSMTGYASAQLEASATDADSGARPARLGIEIRSVNSRFLDLSFRLPDELRAQEPGLR
CEEECCCCCHHHCCCCCCCCCCCCCCHHHCEEEEECCCHHEEEEECCCHHHHCCCCCHH
ALVTQHLKRGKVEVRASIESEAQGLIAPPSARMLQQLNSAQDSVRAWLPSAAPLSVADAL
HHHHHHHHCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RLCAGSAASSASWSPEGIQALAQRALEDLVAAREREGKRLSAMLQDRLKQLRDLARQAAP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LVPQLVDQQRQRFLERWKEAMALTEGVPVPEAAQDRALAEATAFAIRIDVAEEITRLDSH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDEIERLLKKGGEIGKRLDFLIQELHREANTLGSKSAAMELTRISVDMKVLIEQMREQVQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NIE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]