Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612222
Identifier: 120612222
GI number: 120612222
Start: 3946685
End: 3948073
Strand: Direct
Name: 120612222
Synonym: Aave_3575
Alternate gene names: NA
Gene position: 3946685-3948073 (Clockwise)
Preceding gene: 120612220
Following gene: 120612223
Centisome position: 73.73
GC content: 75.81
Gene sequence:
>1389_bases ATGTCCGCACCATCGGCCTACGCGGTCACAGCCGCCACCACCGCCCGACGCTCCACCGAAAGCACCATGGCCGCGCTGTA CCGCGCCGCCCTGGGTCCGATCGGCGCGGCGCGGTACCTGCCCGCCTTCGAGCGCTTCGACGAAGCAGGCCGCACGTTGC CCGGATGGAACTGGGCGGCCGCGTTGCTCACGCTCAACTGGATGGTGTTCCGGCAGCTGTGGAGCGCAGCGCTCGTCTAT GTCGCCGCACTCGAGGGCCTGGCGCTCCTGGCCGTCGCGGTCGGCCGCTACACCGGCACCTGGCCGCTTCCGGTGCTCGC CGGCCTGGGCCTGGCGGTGCTGCTGGCGGCCACCGTGATCCCGGGGCTCTACGGCAACGCCATCGTCCACGGCGAGATCC GCAAGCGGATCACCAAGGCGCTGGCCGCCTCCGCCACGCTCGCCCAGGCCCAGGAGCGCCTGGAACACAATGCGCCGACG CAGCGCCGGCTCGTGTGGATCGGCGCGGCCAACGCCATGCTGGCCCTGCTGCTGGCCGCCTTGCTGCTGTTCCAGCCGGA TCTGTCCGCCATGGGGTCTGCCACCGCCCCCCACGCGCCGCCTGCTGCCGCGGAGGGGCCACGGGCCACCGCCTCCGCCG TTCAGGAGCCTGCGTCCGGCGCACCCTCCGGGCTGTCCGGGGAAACATCAGCTTCCGCAGGCACCGCCGGTCCGGCCTCC GTCCCCGCCGCGGCCCCCGCCTCCGCGCCATCGGCAGCCGAGCCGGCCGACGGGGCATCCCGGCCCGCTGCTCCCGCGGC GCAGGCGTCGGCACCGGCATCGGCAAGTTCCAGGCCGGCCGTGGCGCCGAGCACCAGCCCGGCGGCCGCATCCCTGCCCG TGCTGCCCCGGCAGGTTGCCAGCGCGGCACCTCGGGCCATGGCGAGTCCCGTCCCGGCAGCTTCCGCGGTCTCTCCGGCC GTGGCGCCGGCATCCGCTGCATCCGCCGCTTCATCGCGGTCCGCGGCGGCCTCGGCAGCAGCACCCACCGCCACCCGTCC CGCCCAGGCACCGGCCAGCGCCGCCTCTCGCCGCGCGGCCGGCTCCGCGGCTTCGCGCCCGGCGGCGGCTGCCACGGCAG ACCGCGCCGACTCCGCGGCGGCGCCCACGCGCAAGCTCTACATCAACGTCGGCCTTTTCGCCGAGCCCGCGAATGCGCAA CGCGCGCACGGCATGCTCCGGCGGGCCGGCATTCCGGCGGCCACGCAGCCGGTCACCGCGGCAGATGGCCGCGAACTGCT GCGGGTGCGCGCCGGCCCGTTCACCTCGGCGTCGCAAGCCAATGCAGCCGCCGCGCGCATCCGGGCCCTCGGGCTGGAAA CCTCGGCCGCGGCTGCGCACCATCCGTGA
Upstream 100 bases:
>100_bases GCCTGTCGGACACCACCCCGCACGCGCCGGCGACAAAACCGCGCTTTCCCGAGCCGGGCCGCCAGCCGGACCGCGGGCGG CCCGTGCCAGAATCCGGGCC
Downstream 100 bases:
>100_bases CGCCACCGCCCGCGGCAGCCCCGTGTTACCGCTCGTGACGTTCCCGGGCAGCCCGCTGCGCTAAGGTCAGGCACCAGACA CCCTGCCCACCTTTTCAGAT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain-Containing Protein
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSAPSAYAVTAATTARRSTESTMAALYRAALGPIGAARYLPAFERFDEAGRTLPGWNWAAALLTLNWMVFRQLWSAALVY VAALEGLALLAVAVGRYTGTWPLPVLAGLGLAVLLAATVIPGLYGNAIVHGEIRKRITKALAASATLAQAQERLEHNAPT QRRLVWIGAANAMLALLLAALLLFQPDLSAMGSATAPHAPPAAAEGPRATASAVQEPASGAPSGLSGETSASAGTAGPAS VPAAAPASAPSAAEPADGASRPAAPAAQASAPASASSRPAVAPSTSPAAASLPVLPRQVASAAPRAMASPVPAASAVSPA VAPASAASAASSRSAAASAAAPTATRPAQAPASAASRRAAGSAASRPAAAATADRADSAAAPTRKLYINVGLFAEPANAQ RAHGMLRRAGIPAATQPVTAADGRELLRVRAGPFTSASQANAAAARIRALGLETSAAAAHHP
Sequences:
>Translated_462_residues MSAPSAYAVTAATTARRSTESTMAALYRAALGPIGAARYLPAFERFDEAGRTLPGWNWAAALLTLNWMVFRQLWSAALVY VAALEGLALLAVAVGRYTGTWPLPVLAGLGLAVLLAATVIPGLYGNAIVHGEIRKRITKALAASATLAQAQERLEHNAPT QRRLVWIGAANAMLALLLAALLLFQPDLSAMGSATAPHAPPAAAEGPRATASAVQEPASGAPSGLSGETSASAGTAGPAS VPAAAPASAPSAAEPADGASRPAAPAAQASAPASASSRPAVAPSTSPAAASLPVLPRQVASAAPRAMASPVPAASAVSPA VAPASAASAASSRSAAASAAAPTATRPAQAPASAASRRAAGSAASRPAAAATADRADSAAAPTRKLYINVGLFAEPANAQ RAHGMLRRAGIPAATQPVTAADGRELLRVRAGPFTSASQANAAAARIRALGLETSAAAAHHP >Mature_461_residues SAPSAYAVTAATTARRSTESTMAALYRAALGPIGAARYLPAFERFDEAGRTLPGWNWAAALLTLNWMVFRQLWSAALVYV AALEGLALLAVAVGRYTGTWPLPVLAGLGLAVLLAATVIPGLYGNAIVHGEIRKRITKALAASATLAQAQERLEHNAPTQ RRLVWIGAANAMLALLLAALLLFQPDLSAMGSATAPHAPPAAAEGPRATASAVQEPASGAPSGLSGETSASAGTAGPASV PAAAPASAPSAAEPADGASRPAAPAAQASAPASASSRPAVAPSTSPAAASLPVLPRQVASAAPRAMASPVPAASAVSPAV APASAASAASSRSAAASAAAPTATRPAQAPASAASRRAAGSAASRPAAAATADRADSAAAPTRKLYINVGLFAEPANAQR AHGMLRRAGIPAATQPVTAADGRELLRVRAGPFTSASQANAAAARIRALGLETSAAAAHHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45510; Mature: 45379
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSAYAVTAATTARRSTESTMAALYRAALGPIGAARYLPAFERFDEAGRTLPGWNWAA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ALLTLNWMVFRQLWSAALVYVAALEGLALLAVAVGRYTGTWPLPVLAGLGLAVLLAATVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PGLYGNAIVHGEIRKRITKALAASATLAQAQERLEHNAPTQRRLVWIGAANAMLALLLAA CCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHH LLLFQPDLSAMGSATAPHAPPAAAEGPRATASAVQEPASGAPSGLSGETSASAGTAGPAS HHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VPAAAPASAPSAAEPADGASRPAAPAAQASAPASASSRPAVAPSTSPAAASLPVLPRQVA CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH SAAPRAMASPVPAASAVSPAVAPASAASAASSRSAAASAAAPTATRPAQAPASAASRRAA HHCCHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC GSAASRPAAAATADRADSAAAPTRKLYINVGLFAEPANAQRAHGMLRRAGIPAATQPVTA CCCCCCCCHHHHHHCCCCCCCCCEEEEEEECEEECCCCHHHHHHHHHHCCCCCCCCCCCH ADGRELLRVRAGPFTSASQANAAAARIRALGLETSAAAAHHP HCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure SAPSAYAVTAATTARRSTESTMAALYRAALGPIGAARYLPAFERFDEAGRTLPGWNWAA CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ALLTLNWMVFRQLWSAALVYVAALEGLALLAVAVGRYTGTWPLPVLAGLGLAVLLAATVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PGLYGNAIVHGEIRKRITKALAASATLAQAQERLEHNAPTQRRLVWIGAANAMLALLLAA CCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHH LLLFQPDLSAMGSATAPHAPPAAAEGPRATASAVQEPASGAPSGLSGETSASAGTAGPAS HHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VPAAAPASAPSAAEPADGASRPAAPAAQASAPASASSRPAVAPSTSPAAASLPVLPRQVA CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH SAAPRAMASPVPAASAVSPAVAPASAASAASSRSAAASAAAPTATRPAQAPASAASRRAA HHCCHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC GSAASRPAAAATADRADSAAAPTRKLYINVGLFAEPANAQRAHGMLRRAGIPAATQPVTA CCCCCCCCHHHHHHCCCCCCCCCEEEEEEECEEECCCCHHHHHHHHHHCCCCCCCCCCCH ADGRELLRVRAGPFTSASQANAAAARIRALGLETSAAAAHHP HCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA