Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612115
Identifier: 120612115
GI number: 120612115
Start: 3825483
End: 3827012
Strand: Reverse
Name: 120612115
Synonym: Aave_3462
Alternate gene names: NA
Gene position: 3827012-3825483 (Counterclockwise)
Preceding gene: 120612116
Following gene: 120612113
Centisome position: 71.5
GC content: 73.66
Gene sequence:
>1530_bases ATGCCCCGTTCCGTCACATCCTCTTCGCCGCCACGCCCGCCCGGCCCTGCCCACCCCGACCATCCGCCGCCATCCGCGGC CGAGCGGCCTGCCCGACGGCGCCGGCAGGCCGCTGGCACGCCGGGGCCGTCGGCGCCGGGAATGCCGTCGCCGCCGCGGC GCCCGGGGCTTTCCCTGCCGATCACCCGCGAGCGCGCCACGCTGCGCCGGATGGTGCAGGGCCCCGCCTTGCTGGACAAC ACCGCCGCGCTGTCTCGCATGGGCTTCGACCCCCGGGCGCAGTTGCTGTGCGCGCCTCCCGGGCGGCGCCCCGTGGAGGC TGCCGCACCGGGTGCGCTTTTCCTTCCCATGGCGCTGCCTGTGCCGCCGGCCCCGGTGGTCGCGCTGCCTTCCGGCGATC CCGTGGCCGCGCAGCGGCGGCAGGTGGTCGATGGGCTCTGCGAACTGCGTGCCCTGGCAGCCGAAGTGCATGCCGAAGGC GCGAGCCCGGACGACGAGCCCGCCGCCTTCCGCAAGCTCGACAAGCTGGCGATGCCGGCGATCGTGTCCGCCCTCAATGC GGAGGACCCGCGGCTGCGCCTCGTCTATGCCCACGCCAGCGTCCCGGACGACCGGGGCGTGGTTCCGGACCACCGCGGCT TCGGCTCCGTGGAGTGGCGCAGCTTCCTGGCGGATGCGGCGCCCGGCCGATGGCGGATCGTGCTCGACAACGCCGCCCAC AATCTCGCGCTGGACCTGCATGTCGAGGGACTGCCCGGCGAGCCGGGGCGCCGTGGCTCCGTGGTGCACATGAACTCGTC CGTTGCCGAGGGCGCCGAGCCGATCATCACGGCTGCCGAGATGGCGGCCCACCTGCGCCTGCCCGAGGGCTGGCCGCTGT TGCTGCTGGATGTGCCCGCCCAGAAGAGCCTGCGCTCCTGCAGGATCTTCGCGCTGTCGATGGCCCTCAAGTGCGCCGCC GATGCATCCCTGGAGGAACTGCACGCCCGGCAACTGCGCGGCGAGCCGCCGTCCTTCGATACGGTCGAGGTGGATGCCGA GCTGCTGCTGCCGGCCGAGTATTCCGGCGAGGCCGACAGCCTGTCGGACGGCAGCACGGCCGCATCGGCGGACAGCCCGG CGACCGGCTCCGTCGCCCCGGCGACCCCGCAGCCGGTGGGCCTGCTCGCGCACTACGTCAAGACGGTGGCGGACGTGCTG GGGCCGGCCTACATGAAGCATGCCCAGTCCCGCACGGCCGTGCAGGGCTATCTCGACGGGTTGCCGCACGGGGCCCGCGA TCAGCCCGTGAACCGCAAGGGACAGACGCTGCTGGAAAGGCACGACGCCCACCGGGTGGCCCGGTGGCCCGGCCCTGCGG CGCGCAGGCCCGGCCCGCTGCTGCAGAGCGCGTCGATCGAGCTCAAGCGCATCGCCTTCCTCGACAAGGCGATCCGCCAT GCTGCCCGGTGCAGCGCGCAGGACATCCTGCCGCTGTGCGAGGCCATGGGCAACGTGGACAGCCGCTGGCGCGACTGGTA TCGGCACTGA
Upstream 100 bases:
>100_bases GTTCGCCCGGCAGGCACCCGTTTCGCGCCGCCGGGCGCCTTTCCGCAGGCCACGTGCATGCTCGGCGGCATTGCCCTCGA AGGCACTGCCTTGCCCCGCC
Downstream 100 bases:
>100_bases CGGGGGTCAGGCCAGCGGATCGGCACCCGCATCGCCGGGCGCGCTGCGCAGCCGGCTCGGCGCCAGCGCCCCCGCGGAGT CGAGGATCGGGTAGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MPRSVTSSSPPRPPGPAHPDHPPPSAAERPARRRRQAAGTPGPSAPGMPSPPRRPGLSLPITRERATLRRMVQGPALLDN TAALSRMGFDPRAQLLCAPPGRRPVEAAAPGALFLPMALPVPPAPVVALPSGDPVAAQRRQVVDGLCELRALAAEVHAEG ASPDDEPAAFRKLDKLAMPAIVSALNAEDPRLRLVYAHASVPDDRGVVPDHRGFGSVEWRSFLADAAPGRWRIVLDNAAH NLALDLHVEGLPGEPGRRGSVVHMNSSVAEGAEPIITAAEMAAHLRLPEGWPLLLLDVPAQKSLRSCRIFALSMALKCAA DASLEELHARQLRGEPPSFDTVEVDAELLLPAEYSGEADSLSDGSTAASADSPATGSVAPATPQPVGLLAHYVKTVADVL GPAYMKHAQSRTAVQGYLDGLPHGARDQPVNRKGQTLLERHDAHRVARWPGPAARRPGPLLQSASIELKRIAFLDKAIRH AARCSAQDILPLCEAMGNVDSRWRDWYRH
Sequences:
>Translated_509_residues MPRSVTSSSPPRPPGPAHPDHPPPSAAERPARRRRQAAGTPGPSAPGMPSPPRRPGLSLPITRERATLRRMVQGPALLDN TAALSRMGFDPRAQLLCAPPGRRPVEAAAPGALFLPMALPVPPAPVVALPSGDPVAAQRRQVVDGLCELRALAAEVHAEG ASPDDEPAAFRKLDKLAMPAIVSALNAEDPRLRLVYAHASVPDDRGVVPDHRGFGSVEWRSFLADAAPGRWRIVLDNAAH NLALDLHVEGLPGEPGRRGSVVHMNSSVAEGAEPIITAAEMAAHLRLPEGWPLLLLDVPAQKSLRSCRIFALSMALKCAA DASLEELHARQLRGEPPSFDTVEVDAELLLPAEYSGEADSLSDGSTAASADSPATGSVAPATPQPVGLLAHYVKTVADVL GPAYMKHAQSRTAVQGYLDGLPHGARDQPVNRKGQTLLERHDAHRVARWPGPAARRPGPLLQSASIELKRIAFLDKAIRH AARCSAQDILPLCEAMGNVDSRWRDWYRH >Mature_508_residues PRSVTSSSPPRPPGPAHPDHPPPSAAERPARRRRQAAGTPGPSAPGMPSPPRRPGLSLPITRERATLRRMVQGPALLDNT AALSRMGFDPRAQLLCAPPGRRPVEAAAPGALFLPMALPVPPAPVVALPSGDPVAAQRRQVVDGLCELRALAAEVHAEGA SPDDEPAAFRKLDKLAMPAIVSALNAEDPRLRLVYAHASVPDDRGVVPDHRGFGSVEWRSFLADAAPGRWRIVLDNAAHN LALDLHVEGLPGEPGRRGSVVHMNSSVAEGAEPIITAAEMAAHLRLPEGWPLLLLDVPAQKSLRSCRIFALSMALKCAAD ASLEELHARQLRGEPPSFDTVEVDAELLLPAEYSGEADSLSDGSTAASADSPATGSVAPATPQPVGLLAHYVKTVADVLG PAYMKHAQSRTAVQGYLDGLPHGARDQPVNRKGQTLLERHDAHRVARWPGPAARRPGPLLQSASIELKRIAFLDKAIRHA ARCSAQDILPLCEAMGNVDSRWRDWYRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54264; Mature: 54133
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSVTSSSPPRPPGPAHPDHPPPSAAERPARRRRQAAGTPGPSAPGMPSPPRRPGLSLP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ITRERATLRRMVQGPALLDNTAALSRMGFDPRAQLLCAPPGRRPVEAAAPGALFLPMALP CCHHHHHHHHHHHCCCHHCCHHHHHHCCCCCCCCEEECCCCCCCCHHCCCCEEEEEEECC VPPAPVVALPSGDPVAAQRRQVVDGLCELRALAAEVHAEGASPDDEPAAFRKLDKLAMPA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IVSALNAEDPRLRLVYAHASVPDDRGVVPDHRGFGSVEWRSFLADAAPGRWRIVLDNAAH HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC NLALDLHVEGLPGEPGRRGSVVHMNSSVAEGAEPIITAAEMAAHLRLPEGWPLLLLDVPA EEEEEEEEECCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC QKSLRSCRIFALSMALKCAADASLEELHARQLRGEPPSFDTVEVDAELLLPAEYSGEADS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCCCC LSDGSTAASADSPATGSVAPATPQPVGLLAHYVKTVADVLGPAYMKHAQSRTAVQGYLDG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPHGARDQPVNRKGQTLLERHDAHRVARWPGPAARRPGPLLQSASIELKRIAFLDKAIRH CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH AARCSAQDILPLCEAMGNVDSRWRDWYRH HHHCCHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure PRSVTSSSPPRPPGPAHPDHPPPSAAERPARRRRQAAGTPGPSAPGMPSPPRRPGLSLP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ITRERATLRRMVQGPALLDNTAALSRMGFDPRAQLLCAPPGRRPVEAAAPGALFLPMALP CCHHHHHHHHHHHCCCHHCCHHHHHHCCCCCCCCEEECCCCCCCCHHCCCCEEEEEEECC VPPAPVVALPSGDPVAAQRRQVVDGLCELRALAAEVHAEGASPDDEPAAFRKLDKLAMPA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IVSALNAEDPRLRLVYAHASVPDDRGVVPDHRGFGSVEWRSFLADAAPGRWRIVLDNAAH HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC NLALDLHVEGLPGEPGRRGSVVHMNSSVAEGAEPIITAAEMAAHLRLPEGWPLLLLDVPA EEEEEEEEECCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC QKSLRSCRIFALSMALKCAADASLEELHARQLRGEPPSFDTVEVDAELLLPAEYSGEADS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCCCC LSDGSTAASADSPATGSVAPATPQPVGLLAHYVKTVADVLGPAYMKHAQSRTAVQGYLDG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPHGARDQPVNRKGQTLLERHDAHRVARWPGPAARRPGPLLQSASIELKRIAFLDKAIRH CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH AARCSAQDILPLCEAMGNVDSRWRDWYRH HHHCCHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA