Click here to switch to the map view.

The map label for this gene is insH10 [H]

Identifier: 120612113

GI number: 120612113

Start: 3822570

End: 3823532

Strand: Reverse

Name: insH10 [H]

Synonym: Aave_3460

Alternate gene names: 120612113

Gene position: 3823532-3822570 (Counterclockwise)

Preceding gene: 120612115

Following gene: 120612112

Centisome position: 71.43

GC content: 64.38

Gene sequence:

>963_bases
ATGAAACAGCACAGCCTGGGCCTGGGAATGACGGCGAAGCGAACGCGGCGGCGGGAATTCCTGGATGAGATGGAGAAGGT
CGTGCCATGGCCCGAACTGGTGGCCCTGGTGTCGCCGTACCTGCCCGAAGGCAAGCGGGGGCGTCCTCCGTTCCCGTGCG
AGACCATGCTGCGCATCCATTTCATGCAGCAGTGGTTCGCGCTGAGCGACCCGGCCATGGAGGAAGCGCTGCACGACATG
CCGGTGTTCCGCGAGTTCGCAGGGCTCGAAGGCTGGGATGAAAGGCTGCCCGACGAGAGCACGATCCTGCGGTTCCGACA
CCTGCTGGAGAAGCACAAGCTGGCTGTGCAGATCCTGCAGACCGTCAACGATCTGCTCAGCGCCAAGGGCGTGATGCTCA
AGAGCGGCACGGTGGTGGACGCCACCTTGATCGCAGCGCCCAGCTCGACCAAGAACAGCAGCGGCGAGCGCGACCCGGAG
ATGAAGCAAAGCCGCAAGGGGCAGCAGTGGTACTTCGGCATGAAGTGCCATATCGGAGTGGACGCCGACTCGGGCCTGGT
ACACACCGTGCGCGGCACCAGCGGCGCGGTCAATGATGTGATCGAGGCCAACAGTCTGGTGCGCGCAAGCGACCGTGATG
TCTATGCCGATGCTGGCTACCAAGGCGCCGGCCAACGCCCTGATGCCAGGCGCGACGTGAACTGGCACATCGCCATGCGG
CCGGGCAAACGTCGCCTGCTGGATCCGGCCAAACCGATCGAAGCCTTGACCCGACAACTCGAGCGCGTGAAGGCGCACAT
CCGCGCGCGGGTCGAACACCCGTTCCGCGTTCTCAAGCGCCAGTTCGGGCATGCCAAGGTGCGCTACCGAGGGCTGGCCA
AGAACACGGCACAGCTGCACACGCTGTTTGCGTTGGCCAATCTCTGGCTGGTGCGCCGCAAATTGCTGGCTGCCTTGGCA
TGA

Upstream 100 bases:

>100_bases
GCATGGCCCCGCGGCGCCGCGGGCGGCCCTAAGGAAGGTCTGCATAAACCGCCCCACGACATGCTTGGCATCGGCATGAA
GCCCTGAGACGATACGTCGC

Downstream 100 bases:

>100_bases
GTGCGTCCGCAGTTCGCCAGACAGGCCAAGGCGGCGGCCAATCTACGTCGCATTCACCCGAACTGAAGCGAAACGGGCCC
GGAGCGCCATACACATCAAC

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWPELVALVSPYLPEGKRGRPPFPCETMLRIHFMQQWFALSDPAMEEALHDM
PVFREFAGLEGWDERLPDESTILRFRHLLEKHKLAVQILQTVNDLLSAKGVMLKSGTVVDATLIAAPSSTKNSSGERDPE
MKQSRKGQQWYFGMKCHIGVDADSGLVHTVRGTSGAVNDVIEANSLVRASDRDVYADAGYQGAGQRPDARRDVNWHIAMR
PGKRRLLDPAKPIEALTRQLERVKAHIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLHTLFALANLWLVRRKLLAALA

Sequences:

>Translated_320_residues
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWPELVALVSPYLPEGKRGRPPFPCETMLRIHFMQQWFALSDPAMEEALHDM
PVFREFAGLEGWDERLPDESTILRFRHLLEKHKLAVQILQTVNDLLSAKGVMLKSGTVVDATLIAAPSSTKNSSGERDPE
MKQSRKGQQWYFGMKCHIGVDADSGLVHTVRGTSGAVNDVIEANSLVRASDRDVYADAGYQGAGQRPDARRDVNWHIAMR
PGKRRLLDPAKPIEALTRQLERVKAHIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLHTLFALANLWLVRRKLLAALA
>Mature_320_residues
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWPELVALVSPYLPEGKRGRPPFPCETMLRIHFMQQWFALSDPAMEEALHDM
PVFREFAGLEGWDERLPDESTILRFRHLLEKHKLAVQILQTVNDLLSAKGVMLKSGTVVDATLIAAPSSTKNSSGERDPE
MKQSRKGQQWYFGMKCHIGVDADSGLVHTVRGTSGAVNDVIEANSLVRASDRDVYADAGYQGAGQRPDARRDVNWHIAMR
PGKRRLLDPAKPIEALTRQLERVKAHIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLHTLFALANLWLVRRKLLAALA

Specific function: Involved in the transposition of the insertion sequence IS5 [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787634, Length=302, Percent_Identity=52.6490066225166, Blast_Score=319, Evalue=1e-88,
Organism=Escherichia coli, GI1789921, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1789612, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1789355, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1788518, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1788342, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1787592, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1786877, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1786764, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1786453, Length=300, Percent_Identity=53, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI1788303, Length=300, Percent_Identity=52.6666666666667, Blast_Score=317, Evalue=9e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559
- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772; PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 36290; Mature: 36290

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWPELVALVSPYLPEGKRGRPPFPCETMLRIH
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
FMQQWFALSDPAMEEALHDMPVFREFAGLEGWDERLPDESTILRFRHLLEKHKLAVQILQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TVNDLLSAKGVMLKSGTVVDATLIAAPSSTKNSSGERDPEMKQSRKGQQWYFGMKCHIGV
HHHHHHHHCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEEC
DADSGLVHTVRGTSGAVNDVIEANSLVRASDRDVYADAGYQGAGQRPDARRDVNWHIAMR
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC
PGKRRLLDPAKPIEALTRQLERVKAHIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLH
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHH
TLFALANLWLVRRKLLAALA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWPELVALVSPYLPEGKRGRPPFPCETMLRIH
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
FMQQWFALSDPAMEEALHDMPVFREFAGLEGWDERLPDESTILRFRHLLEKHKLAVQILQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TVNDLLSAKGVMLKSGTVVDATLIAAPSSTKNSSGERDPEMKQSRKGQQWYFGMKCHIGV
HHHHHHHHCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEEC
DADSGLVHTVRGTSGAVNDVIEANSLVRASDRDVYADAGYQGAGQRPDARRDVNWHIAMR
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC
PGKRRLLDPAKPIEALTRQLERVKAHIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLH
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHH
TLFALANLWLVRRKLLAALA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9097039; 9097040; 9278503 [H]