Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612094
Identifier: 120612094
GI number: 120612094
Start: 3799687
End: 3801291
Strand: Direct
Name: 120612094
Synonym: Aave_3441
Alternate gene names: NA
Gene position: 3799687-3801291 (Clockwise)
Preceding gene: 120612093
Following gene: 120612095
Centisome position: 70.99
GC content: 67.85
Gene sequence:
>1605_bases ATGCATCACACGCCATTGCCATCCCGCCGCCCATCCGCATCTGCCCTGCTGCTGGGCGGTATCGTCGCCGCCTGTGCCGC GCCCGCCTGGGCCCAGACGGCCGAGCCCGAGCCCGGCATGTGGAGCTTCGACGGTGAGCTGGATGGCCGCCCGGGCCGCA GCCTGCACATCGACACCCAGGCCGGCCGCACCATGGCCGTTTCCTACCTGGGGTACCGCGCCGACGGCTCGTCGTTCTTC CTGCAGGCCGCGGGCATCCGGCCCAACACCTCTTCCACCTTCGACGGCACGCTGAGCGAATTCCGCAACGGCCCGGTGAT CGGCGGCGGCGCCGGCCAGGGCGAGACCGCAGCCACCGCGGGCCCCGTGAAAATCGTCTTCGACACGCCCACCACGGGCA CCGTCACGCTGCCGGGCGACGTGCCGCGGCGTATTTCGCGCTACCAGTACGAAGATCCTGCCGTACGGCTCACGCGCGAC TCCATCGCCGCCGATACCTTCGCTGGCGCGACGCAGAGCTCGAGAACTCCCCACAAAATCGACATGAAGCTGGAGAATGG CCAGCTCTCCATGAAGATCGAAACCAGCGCGGAACGGCGAAACTGCATCTATACCGGCAACATCCAGCCCGCAGGTTCGG GCGTGTCTTCCGACGGGACGTACCTGTGCACCAAGGACGATGGAACGCAGGAGACAGGCGCTTACCGCGCAGAGCATTTC ATGATGCAGGCCGATGGCATATTCCGGGGGACCCTGTGGCGTGACGGCGCGTCCACCGACCTGCTCGGCTACTGCATGGG GGGTGCCGTCTTCATGGACTGGCCGGGGCTTTGCCCCACGGCACGAGGGTTCCAGACGCAGCCGGAACCCGGCATCTGGG GTTTCGAGGGCGAGGTGAGCGGCCGGCCCGGGCGCAGCCTGCAGATCGACACGCAGCAGGGACGCGCCATGGTGGTGACC TATGTAGGTTACCGGCCCGACGGCTCCTCGCTCTTCCTGCAGGCCGGGGGCGTACGGGCCGAAGGCGACACGGCCTTTAC CGGCAACCTGCAGGAATACCGCAACGGGCCCGTGCTGGGCGGCGGTACCCGCAGTGGCGAGCAGGCCGCCGACCTGGGCC CAATGCGCATCACCTTCGACTCGGCCACCACCGGCACCGTCACCCTGCCCGGCGACACGCCCCGGCGCATCGTGCGGTTC CAGTACGAGGATCTCACGGCGCGGTTCAACCAGACCTATCGCATCCGGTACGCCGGAGGCTCCACATTGGGGGGCGCACC GTCCCTGCAGCTCAAGTTCCAGGCACGCGACGGGCAGTTCCAGATGGTCGAAAACGGCGGGGATGGCACCGGGGGCTGCA CCTACACGGGCAGCTACCGGTTCGCCGGCCGGAGCCTCGTCAGCCCCTCCGGAACTTACGTGTGCGACGGGTCCGGGGCA ACGGGCACCTACAGCAACTACCAGTTCGAAGTGGATGCCGGTGGGCACATCGTTTTCTACAAGTCACCGCGCCGGGTCTA TGGCGGCGGCTTCTGTGTCCGGCGGACGGAAGAAGGCAGCTTCCGCCCCTGCAGCACCGAAGAGCTGAACACGCCGGCCT CCTGA
Upstream 100 bases:
>100_bases CGCGGTAACACGAACCCCGCGACGGAGGGGTAGGCAGGGCGGGAACTCTGTGTTCAAGTGCGAGGTTCATCCGACATGTC ACTTGACCCGAGGGAGTTCC
Downstream 100 bases:
>100_bases CGGGAAGTGCAGCCATGGCGCGAGGCCGGGGCTGCACATGCCACGTGGCGCGGACCGCCGCCGTGCCGGGCGCGGCCGCA TCCCAAAGCGGCACCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MHHTPLPSRRPSASALLLGGIVAACAAPAWAQTAEPEPGMWSFDGELDGRPGRSLHIDTQAGRTMAVSYLGYRADGSSFF LQAAGIRPNTSSTFDGTLSEFRNGPVIGGGAGQGETAATAGPVKIVFDTPTTGTVTLPGDVPRRISRYQYEDPAVRLTRD SIAADTFAGATQSSRTPHKIDMKLENGQLSMKIETSAERRNCIYTGNIQPAGSGVSSDGTYLCTKDDGTQETGAYRAEHF MMQADGIFRGTLWRDGASTDLLGYCMGGAVFMDWPGLCPTARGFQTQPEPGIWGFEGEVSGRPGRSLQIDTQQGRAMVVT YVGYRPDGSSLFLQAGGVRAEGDTAFTGNLQEYRNGPVLGGGTRSGEQAADLGPMRITFDSATTGTVTLPGDTPRRIVRF QYEDLTARFNQTYRIRYAGGSTLGGAPSLQLKFQARDGQFQMVENGGDGTGGCTYTGSYRFAGRSLVSPSGTYVCDGSGA TGTYSNYQFEVDAGGHIVFYKSPRRVYGGGFCVRRTEEGSFRPCSTEELNTPAS
Sequences:
>Translated_534_residues MHHTPLPSRRPSASALLLGGIVAACAAPAWAQTAEPEPGMWSFDGELDGRPGRSLHIDTQAGRTMAVSYLGYRADGSSFF LQAAGIRPNTSSTFDGTLSEFRNGPVIGGGAGQGETAATAGPVKIVFDTPTTGTVTLPGDVPRRISRYQYEDPAVRLTRD SIAADTFAGATQSSRTPHKIDMKLENGQLSMKIETSAERRNCIYTGNIQPAGSGVSSDGTYLCTKDDGTQETGAYRAEHF MMQADGIFRGTLWRDGASTDLLGYCMGGAVFMDWPGLCPTARGFQTQPEPGIWGFEGEVSGRPGRSLQIDTQQGRAMVVT YVGYRPDGSSLFLQAGGVRAEGDTAFTGNLQEYRNGPVLGGGTRSGEQAADLGPMRITFDSATTGTVTLPGDTPRRIVRF QYEDLTARFNQTYRIRYAGGSTLGGAPSLQLKFQARDGQFQMVENGGDGTGGCTYTGSYRFAGRSLVSPSGTYVCDGSGA TGTYSNYQFEVDAGGHIVFYKSPRRVYGGGFCVRRTEEGSFRPCSTEELNTPAS >Mature_534_residues MHHTPLPSRRPSASALLLGGIVAACAAPAWAQTAEPEPGMWSFDGELDGRPGRSLHIDTQAGRTMAVSYLGYRADGSSFF LQAAGIRPNTSSTFDGTLSEFRNGPVIGGGAGQGETAATAGPVKIVFDTPTTGTVTLPGDVPRRISRYQYEDPAVRLTRD SIAADTFAGATQSSRTPHKIDMKLENGQLSMKIETSAERRNCIYTGNIQPAGSGVSSDGTYLCTKDDGTQETGAYRAEHF MMQADGIFRGTLWRDGASTDLLGYCMGGAVFMDWPGLCPTARGFQTQPEPGIWGFEGEVSGRPGRSLQIDTQQGRAMVVT YVGYRPDGSSLFLQAGGVRAEGDTAFTGNLQEYRNGPVLGGGTRSGEQAADLGPMRITFDSATTGTVTLPGDTPRRIVRF QYEDLTARFNQTYRIRYAGGSTLGGAPSLQLKFQARDGQFQMVENGGDGTGGCTYTGSYRFAGRSLVSPSGTYVCDGSGA TGTYSNYQFEVDAGGHIVFYKSPRRVYGGGFCVRRTEEGSFRPCSTEELNTPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56892; Mature: 56892
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHTPLPSRRPSASALLLGGIVAACAAPAWAQTAEPEPGMWSFDGELDGRPGRSLHIDTQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEECC AGRTMAVSYLGYRADGSSFFLQAAGIRPNTSSTFDGTLSEFRNGPVIGGGAGQGETAATA CCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCC GPVKIVFDTPTTGTVTLPGDVPRRISRYQYEDPAVRLTRDSIAADTFAGATQSSRTPHKI CCEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCCCCEEE DMKLENGQLSMKIETSAERRNCIYTGNIQPAGSGVSSDGTYLCTKDDGTQETGAYRAEHF EEEEECCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEE MMQADGIFRGTLWRDGASTDLLGYCMGGAVFMDWPGLCPTARGFQTQPEPGIWGFEGEVS EEECCCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GRPGRSLQIDTQQGRAMVVTYVGYRPDGSSLFLQAGGVRAEGDTAFTGNLQEYRNGPVLG CCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCEEECCHHHHCCCCEEC GGTRSGEQAADLGPMRITFDSATTGTVTLPGDTPRRIVRFQYEDLTARFNQTYRIRYAGG CCCCCCCHHHCCCCEEEEECCCCCCEEECCCCCCCCEEEEEEHHHHHHCCCEEEEEECCC STLGGAPSLQLKFQARDGQFQMVENGGDGTGGCTYTGSYRFAGRSLVSPSGTYVCDGSGA CCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEECCEEECCCEECCCCCCEEECCCCC TGTYSNYQFEVDAGGHIVFYKSPRRVYGGGFCVRRTEEGSFRPCSTEELNTPAS CCCCCCEEEEECCCCEEEEECCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHHTPLPSRRPSASALLLGGIVAACAAPAWAQTAEPEPGMWSFDGELDGRPGRSLHIDTQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEECC AGRTMAVSYLGYRADGSSFFLQAAGIRPNTSSTFDGTLSEFRNGPVIGGGAGQGETAATA CCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCC GPVKIVFDTPTTGTVTLPGDVPRRISRYQYEDPAVRLTRDSIAADTFAGATQSSRTPHKI CCEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCCCCEEE DMKLENGQLSMKIETSAERRNCIYTGNIQPAGSGVSSDGTYLCTKDDGTQETGAYRAEHF EEEEECCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEE MMQADGIFRGTLWRDGASTDLLGYCMGGAVFMDWPGLCPTARGFQTQPEPGIWGFEGEVS EEECCCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GRPGRSLQIDTQQGRAMVVTYVGYRPDGSSLFLQAGGVRAEGDTAFTGNLQEYRNGPVLG CCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCEEECCCCEEECCHHHHCCCCEEC GGTRSGEQAADLGPMRITFDSATTGTVTLPGDTPRRIVRFQYEDLTARFNQTYRIRYAGG CCCCCCCHHHCCCCEEEEECCCCCCEEECCCCCCCCEEEEEEHHHHHHCCCEEEEEECCC STLGGAPSLQLKFQARDGQFQMVENGGDGTGGCTYTGSYRFAGRSLVSPSGTYVCDGSGA CCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEECCEEECCCEECCCCCCEEECCCCC TGTYSNYQFEVDAGGHIVFYKSPRRVYGGGFCVRRTEEGSFRPCSTEELNTPAS CCCCCCEEEEECCCCEEEEECCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA